Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00790 ATGGAATACAACTTGCTTATCTACATAATTTTCCCTTTCCTTTTTCTTATACCTATAAAATTATTATTATTATTCTCCAAAAGAAGACTCATAAAACTTCCACCATGCCCACCTTCTTTTCCTATAATTGGCAACCTCCATCAACTTAAACAACCGATTCATCTATATTTTCATGAACTCTCCCAAAAATATGGTCCAATTTTCACCCTTAAATTTGGGTCTCAACTTGTTGCCGTAGTTTCATCGGCATCTATTGCCGAAGAATGTTTCACCAAAAACGACGTTAATTTTGCAAACCGTATACACTCTATCAAAACCAAGTATCTTGGTTTCAACAATACAAACATTCTTACCTCATCATATGGAGATCATTGGCGTAACCTACGCCGTATAAGCTCAATAGAAATTCTCTCCACTAATCGTCTCAACTCTTTTTCAGAAATCCGTAAAGACGAGACGATTAGATTAGTTCGAAATCTTGCTAAAAAGTCTTACAAAGACTTCACAAAAGTTGAGCTTAGACCCTTGTTTGCTGAGCTAACATTTAACACGATCATGAGAATGGTTTGTGGTAAACGCTTTTACGGCGATGAATCTGATGGAACAAACGCCGACGAGGCAAAGAAATTTCGAGATGTCATGAATGAGATGCAAGAGTTTGGGTTGGCATCCTATCTTGGTGATTTTGTGCCTTTATTCAGATTGCTTGATTTTAGTGGTTATAAGAATAAGTTAAAAAGGGTTGGAGAAAAGATGGATGCACTTTTCCAAGGACTAGTTGATGATCATCGTAAGAACAAAAAGGAAAATCAAAATACCATGATTGATCACTTACTTTCTTTACAAGAATCACAACCTGATTATTACAGTGACCAAATTATCAAAGGGCTTATTATGGCATTAATAGTTGCTGGAACAGAAACTTCCGCTATAACGTTAGAGTGGGCGATGTCTAATTTGGTAAACCATCCAGAAGTATTGGAAAAGGCAAGGATTGAATTGGACAATCACATTGGACAAGAACACTTAATTGAAGAAGAAAAAGCGACCAAATTACAATACCTTCAAAATATTATCTCCGAGACGCTACGATTGCATCTACCGGCACCAATGTTGCTACCACATGTATCATCTGATGGTTGTACCGTGGGAGGCTATGATGTGCCTCAAAACACCATATTGATGGTTAATGCATGGGATATTCACAGGGACCCTGATTTGTGGGCTGATCCAACGAGCTTTAAGCCTGAGAGATTTGAGAATAGTCGACAAGCCGACATGCATGGCTTTATTCCTTTTGGTATGGGGAGGAGGTCCTGTCCTGGATCAGGATTAGCCCTAAGAACTTTAAGCTTAACTCTGGGCTCGTTGATTCAATGTTTTGAGTGGAAAAGAGTTAACAATGAAGAAGTTAACATGACTGAAGGACGTGGAACCCTGGTGCCAATGGCCATTCCATTGGAGGTCCAATGCAAAACGCGTCCAATAATCAATAAGATTTTCTCTTAG 1509 0.3844 MEYNLLIYIIFPFLFLIPIKLLLLFSKRRLIKLPPCPPSFPIIGNLHQLKQPIHLYFHELSQKYGPIFTLKFGSQLVAVVSSASIAEECFTKNDVNFANRIHSIKTKYLGFNNTNILTSSYGDHWRNLRRISSIEILSTNRLNSFSEIRKDETIRLVRNLAKKSYKDFTKVELRPLFAELTFNTIMRMVCGKRFYGDESDGTNADEAKKFRDVMNEMQEFGLASYLGDFVPLFRLLDFSGYKNKLKRVGEKMDALFQGLVDDHRKNKKENQNTMIDHLLSLQESQPDYYSDQIIKGLIMALIVAGTETSAITLEWAMSNLVNHPEVLEKARIELDNHIGQEHLIEEEKATKLQYLQNIISETLRLHLPAPMLLPHVSSDGCTVGGYDVPQNTILMVNAWDIHRDPDLWADPTSFKPERFENSRQADMHGFIPFGMGRRSCPGSGLALRTLSLTLGSLIQCFEWKRVNNEEVNMTEGRGTLVPMAIPLEVQCKTRPIINKIFS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00790 502 FunFam Cytochrome P450 family protein 25 497 - -
Trre9g00790 502 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 CDD CYP81 65 487 - -
Trre9g00790 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 SUPERFAMILY Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre9g00790 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00790 502 PANTHER CYTOCHROME P450 82C3-RELATED 13 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00790 Trre-Chr9 6026278 6027908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00790 9 502 Cytochrome P450 AT4G37340 51.594 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00790 K13260 - gmx:100804509 688.723