Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00789 ATGGAAGAATACAAGTTTCTTATCTACATCATTTTCCCATTCCTTTTTCTTATACCTATAAAATTATTATTACTCTCCAACAGAAGATTCAAAAAACTTCCACCATGTCCACCCTCTTTTCCCATAATTGGCAACCTCCATCAACTTAAACAACCACAACCAATTCATCGTTACTTTTATAGCCTCTCCCAAAAATACGGCCCAATTTTCACTCTTAAATTCGGTTCTCAACTTGTAGCCATCGTTTCATCGGCATCAATTGCCGAAGAATGTTTAAACAAAAACGACATTATTTTTGCAAACCGTGTAACCACCGGCAAAACCAAGTATCTTGGTTTCAATAGCACGAACATCTTTAACTCTTCTTATGGAGACCATTGGCGCAACTTACGTCGTATAAGCTCACTCGAAATACTATCCACTAATCGTATCAACTCTTTTTCAGGCATCCGAAGAGACGAGACCACGAGGTTGATTAGAAAACTTTCCGAGAACTCTCATAAAGACTTCAAAAAAGTTGAGCTAAGATCCTTGCTTTTGGAACTTGCATTTAACATGATCATGAGAATGGTTTGTGGTAAACGCTTTTACGGAGATGAATCGGATGGAACAACCGCGGATGAGGCAAAGAAATTTCGAGATATCATGGACGAAATTCAAAAGTTTGCTTTGGGATCCCATCTTGGTGATTTTGTGCCATTATTCATGTTGCTTGATTTTAGTTATCGTAGGAAGTTACAAAGAGTTGCAGAGAAGATGGATGCACTATTTCAAGGACTAGTTGATGATCATCGTAAGAACAAAAATGAAAATAAAGATTCCATGATTGATCACTTACTTTCCTTACAAGAATCACAACCTGATGATTACAGCGACGAAATTATTAAAGGGCTTATTATGGCATTGATAGTGGCAGGAACAGAAACTTCCTCTATAACACTAGAGTGGGCAATGTCTAATTTGTTAAACCATCCAGAGATATTGGAAAAGGCAAAGAATGAATTGGATAATCACATTGGACAAGAGCGCTTAATTGAAGAAGCTCAAGCAATCAAACTACAATATCTTCAAAATATAATCTCTGAGACTATGCGGTTGCACCCACCAGCAACAATGTTGGTGCCACATTTATCATCTGAAGATTGTATTGTGGGAGGATTTGATGTGCCACGTAACACCATGTTGATGGTGAATGCGTGGGCTATTCAGAGGGACCCTAATTTGTGGTCTGACCCGATGAGCTTTAAGCCCGAGAGGTTTGAGAATGGTCAACAAGCTGTTGTGCCTGGCTTCCTTCCTTTCGGGATGGGGAGGAGGGCATGTCCTGGGTCAGGGTTAGCCCTAAGAACTATGGGCTTGACTCTAGGCTCGTTGATTCAATGCTTTGATTGGAAAAGGATCGGCAAAGAAGAAATTAACATGGTCGAAGGACATGGAACTTTGGTGCCCATGGCGATTCCATTGGAGGTCCAATGCAAAGCGCGCCCAATAATCAATAAGATTTTCACTTAA 1512 0.3995 MEEYKFLIYIIFPFLFLIPIKLLLLSNRRFKKLPPCPPSFPIIGNLHQLKQPQPIHRYFYSLSQKYGPIFTLKFGSQLVAIVSSASIAEECLNKNDIIFANRVTTGKTKYLGFNSTNIFNSSYGDHWRNLRRISSLEILSTNRINSFSGIRRDETTRLIRKLSENSHKDFKKVELRSLLLELAFNMIMRMVCGKRFYGDESDGTTADEAKKFRDIMDEIQKFALGSHLGDFVPLFMLLDFSYRRKLQRVAEKMDALFQGLVDDHRKNKNENKDSMIDHLLSLQESQPDDYSDEIIKGLIMALIVAGTETSSITLEWAMSNLLNHPEILEKAKNELDNHIGQERLIEEAQAIKLQYLQNIISETMRLHPPATMLVPHLSSEDCIVGGFDVPRNTMLMVNAWAIQRDPNLWSDPMSFKPERFENGQQAVVPGFLPFGMGRRACPGSGLALRTMGLTLGSLIQCFDWKRIGKEEINMVEGHGTLVPMAIPLEVQCKARPIINKIFT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00789 503 Pfam Cytochrome P450 34 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 Coils Coil 328 348 - -
Trre9g00789 503 FunFam Cytochrome P450 family protein 25 498 - -
Trre9g00789 503 CDD CYP81 67 488 - -
Trre9g00789 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre9g00789 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 SUPERFAMILY Cytochrome P450 34 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PANTHER CYTOCHROME P450 82C3-RELATED 14 495 - -
Trre9g00789 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00789 503 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00789 Trre-Chr9 6008053 6010298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00789 10 502 Cytochrome P450 AT4G37340 50.000 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00789 K13260 - gmx:100804509 667.922