Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00787 ATGTTCCATCTCTATCTTCCACTCATCTCTCTCCTTTTCCTTATCATCACTTTGAAGCTCTTCTTCATCTACACAACAAGAACCTTAAAAAATCTTCCTCCGGGCCCACAATGTCTTCCTATAATAGGAAACCTTCATCAACTCAAACAGCCACTCCATCACACTTTCCACACCTTATCACAAAAACATGGTAAACTATTTTCTCTATGGTTCGGTTCTCGTCTAGTTGTTGTTGTTTCATCCTTAAAAATAGCACAAGAATGTTTTACCAAAGAAAACGACATCATTTTAGCAAATCGACCTCATTTTCTAAGTGGCAAATATGTTGGGTACAACAACACCACGGTGTCACAATCACCTTATGGTGATCATTGGCGCAATCTGCGCCGTATATTATCAATTGAAATACTCTCATCTCACCGTTTGAATTCCTTCTTAGAAATTCGAAAGGATGAGATTATGAGACTAATACAAAAATTAGCACAAATGTCATACAATGATTTTTCGGAAGTGGAACTTAAACCTATATTTTTGGAAATGACATTTAATATTATAATGAGAATGGTGTCGGGAAAAAGATACTATGGTAATGATTGTGATGTTAGTGATGTTGAGGAAGCAAAGGTGTTTAGAGAGATAATTAAGGAGTTTGCTATTTTAGGAGGAGCTAACAACGTTGGTGATTTTTTGGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAAAAGAGGCTTAAGAAGATTAGTAAGAGAAGTGATTCTTTTTTACAAGGGCTTATTGATGAACATCGTCTTGGAAAGAGGAATACTAATACTATGATTGATCATCTCTTAACTCAGCAACAATCACAACCTGAATATTATACTGATCAAACCATCAAAGGACTTATAGTGGTCATGCTACTTGCAGGATCAGACTCATCATCTGTAACCTTAGAATGGGCCATGTCCAATTTATTAAATCATCCAGAAATATTGAAGAAGGCAAAAAATGAATTAAACACTTACATAGGACAAGACCACTTGTTAGATGAGCCTGATATTTTAAATCTTCCTTATCTTCAAAACATTGTTAATGAGACTCTTAGGCTACATCCAGCAGCTCCATTATTAGTGCCTCATTTGTCTTCAAAACAATTTACCATAGATAAATATAATATCCCACAAAATACAATTGTGTTGACCAATGTTTGGGTCATTCATAGAGATCCAAATTTGTGGAGTGATCCTACATGTTTTAAGCCCGAGAGATTTGAGAAAGAAGGTGAGACAAAGAAACTACTTTCATTTGGGATGGGAAGAAGGGCTTGCCCAGGAGAAAATTTGGCGCTACGCAATGTGAGTCTTACTTTGGGCTTATTAATTCAATGTTTTGAGTGGAAATGTATAGGTGAGGAAAAAATTGACATGACCGAAGCAAAAGGAATCACGGTGGGAAAGAAAATTCCCTTAAAAGCAATGTGTAAATTGTGTCATCCATTAAGAATTAAGGATGTTTTTTAG 1503 0.3566 MFHLYLPLISLLFLIITLKLFFIYTTRTLKNLPPGPQCLPIIGNLHQLKQPLHHTFHTLSQKHGKLFSLWFGSRLVVVVSSLKIAQECFTKENDIILANRPHFLSGKYVGYNNTTVSQSPYGDHWRNLRRILSIEILSSHRLNSFLEIRKDEIMRLIQKLAQMSYNDFSEVELKPIFLEMTFNIIMRMVSGKRYYGNDCDVSDVEEAKVFREIIKEFAILGGANNVGDFLGFLRWFDFDGLEKRLKKISKRSDSFLQGLIDEHRLGKRNTNTMIDHLLTQQQSQPEYYTDQTIKGLIVVMLLAGSDSSSVTLEWAMSNLLNHPEILKKAKNELNTYIGQDHLLDEPDILNLPYLQNIVNETLRLHPAAPLLVPHLSSKQFTIDKYNIPQNTIVLTNVWVIHRDPNLWSDPTCFKPERFEKEGETKKLLSFGMGRRACPGENLALRNVSLTLGLLIQCFEWKCIGEEKIDMTEAKGITVGKKIPLKAMCKLCHPLRIKDVF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00787 500 PANTHER CYTOCHROME P450 82C3-RELATED 14 489 - -
Trre9g00787 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre9g00787 500 CDD CYP81 64 484 - -
Trre9g00787 500 Pfam Cytochrome P450 33 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 SUPERFAMILY Cytochrome P450 33 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 FunFam Cytochrome P450 family protein 24 494 - -
Trre9g00787 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00787 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00787 Trre-Chr9 5994547 5997344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00787 8 489 Cytochrome P450 AT4G37370 55.464 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00787 K13260 - gmx:100811727 744.577