Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00770 ATGGATGTGAATGCTATTGGCACCTGTGCAGAACTTATATTTGCTCCAATTGATGCTTCATTTGCTGATGATGCTCCACTTCTACCTTCTGGATTCCGCATCATTTCTCTTGAATCTGCAAAAGAAGCTTCCAGTCCTAATCGCACTCTTGACCTTGCATCTGCCCTTGATGCTGGTGGCCCTATTGGAAACCGAGCTTCAAGTGATAATGCTAGAAATTCTGGCTGTGTGAGATTTGTGATGACAATAGCATTTGAATTTTCATTTGAAAGTCACATGGAAGAGAATGTAGCCTGCATGGCATGTCAATATGTTCGCAGTATTATATCATCAGTCCAAAGGGTAGCATTGGCACTTTCTCCTTCTCATCTGAGTTCACATGTTGGGCTGAGGTCACCGTTAGGTACTCCTGAAGCACAAACCCTTGCTCATTGGATCTGCAACAGTTACAGGTGCTACTTGGGTGTGGATCTACTTAAATCTAATAAGGAAGGAAAATAA 501 0.4251 MDVNAIGTCAELIFAPIDASFADDAPLLPSGFRIISLESAKEASSPNRTLDLASALDAGGPIGNRASSDNARNSGCVRFVMTIAFEFSFESHMEENVACMACQYVRSIISSVQRVALALSPSHLSSHVGLRSPLGTPEAQTLAHWICNSYRCYLGVDLLKSNKEGK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00770 166 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 164 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00770 Trre-Chr9 5845552 5846816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00770 1 165 Homeobox Transcription Factor Family AT1G52150 78.182 1.26e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00770 K09338 - lja:Lj3g3v2315440.3 273.092