Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00757 ATGACGCAATTCACACCAACATTTCAGGTTTTCACCTTTTCATCAAACCAAACACTTTTTTCCAACCCTACCATGGAACAACAATCAAATCAAATCACAATAACTACTACTCCCTGTTCAGAATTTTCCACATCACCTATTAACTCTCTACAAAACTTCAACAAAACCAATTGCATGGAACAGTTACTCGTTCACTGTGCCAATGCAATTGAAGGCAACAATGCAACACTAGCACAACAAATCCTTTGGGTCCTTAACAACACAACTCGACAAGATGGTGACTCAAAACAACGCCTAGCCGGAAGCTTCATTCGAGCTCTCATAAATCGCGCGTCCAAAACCGGTAGTTGCAAAATGCTCGAAGCGGTTACAGAAACCGCAAGTAGTTATAACCGTTGTAACAACCTCGCTATGCAAATCCACAAATTCTCTGTTATTGAGTTAGCTGATTTTGTTGATTTAACGCCTTGGCATCGTTTCGGTTACACTGCAGCTAACTCTACAATTGTAGAAGCTACTAAAGGATTTTCAGTTATTCACATTGTTGATTTGAGTTTAACACATTGCATGCAGATTCCTACTCTAATCGATGCCATTGCTAATCGCGATGAGGTTCCTCCTTTAATCAAGCTCACGGTCGCAGACTCTAGGAATACGAATATTCATATGCCAATTCCACCCTTGCTTGATCTTTCTTATGACGAATTAGGTGCAAAATTGGTTAATTTTGCTAAATCAAAAAACGTGATTATGGAATTCAAAGCTGTTTCTTCAACTTATGCAGATGGATTCACTTCATTGATCGAACATTTACGCGTGCAAGTGCAACATTATAATAAAATTCATGAAGCATTGGTTATAAACTGTCACATGATGCTTCATTATATTCCAGACGAATCTCTTTACGCAGTTAATGATACGAATGCGAATTCAAACTCTTCTTCGTCATTGCGATCAATGTTTCTAGAAGCTTTGCGGAGTTTAGATCCAACAGTTGTTATTTTAGTGGATGAAGACGCGGATTTAACATCAAATGATTTGGTTTGTAGACTAAAATCCGCGTTTAATTATCTCTGGATACCATACGATGCAATGGACACATTTTTACCACAAGATTGTAAACAAAGACAGTGGTATGAAGCAGGAATTTGTTGGAAGATTGAGAATGTGATAGCATATGAAGGGAATGAGAGAATCGAGAGAGTTGAGGCTAAAATCAAGTGGGAACAACGAATGAGAAATGCGCATTTTCAGAGGATTTGTTTCGGTGAGGATTCGATTTTGGAAGTTAAGGCTATGGTTGATGAACATGCAGTTGGATGGGGATTAAAGAAAGAAGATGAGTTTCTTGTGCTTACTTGGAAAGGGAATAATGTTATCTTTGCATCTGCTTGGTTACCTTCTTGA 1407 0.3831 MTQFTPTFQVFTFSSNQTLFSNPTMEQQSNQITITTTPCSEFSTSPINSLQNFNKTNCMEQLLVHCANAIEGNNATLAQQILWVLNNTTRQDGDSKQRLAGSFIRALINRASKTGSCKMLEAVTETASSYNRCNNLAMQIHKFSVIELADFVDLTPWHRFGYTAANSTIVEATKGFSVIHIVDLSLTHCMQIPTLIDAIANRDEVPPLIKLTVADSRNTNIHMPIPPLLDLSYDELGAKLVNFAKSKNVIMEFKAVSSTYADGFTSLIEHLRVQVQHYNKIHEALVINCHMMLHYIPDESLYAVNDTNANSNSSSSLRSMFLEALRSLDPTVVILVDEDADLTSNDLVCRLKSAFNYLWIPYDAMDTFLPQDCKQRQWYEAGICWKIENVIAYEGNERIERVEAKIKWEQRMRNAHFQRICFGEDSILEVKAMVDEHAVGWGLKKEDEFLVLTWKGNNVIFASAWLPS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00757 468 ProSiteProfiles GRAS family profile. 50 466 IPR005202 -
Trre9g00757 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 455 IPR005202 -
Trre9g00757 468 Pfam GRAS domain family 59 465 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00757 Trre-Chr9 5728136 5729542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00757 50 467 GRAS Transcription Factor Family AT3G49950 55.819 6.48e-164 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre9g00757 GRAS 3e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00757 - - mtr:11421838 687.182