Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00747 ATGAAAGCTCATAACTCGAGCTTCAACATCATCATAATCATCTTCTCACTTTCTCTATCCATCTCAGTTACCACTGCAAAACGTATCAATGAATCCGATCATCATATCACAAGAAGAATTCTCCATCAACCATTATTCCCAGCGAGTTCAGCACCACCACCATCACCAACCGTCACACCACCACCACCTTCTTCCTCCGACAACATTCCATTCTTCCATGAATACCCTGAAGGACCACCGTCGGATCAAAATCAAGCAACACCGATAACTTCAAACGCTACAGCAGCAAATCCAACTCCAACACAACAACCAGCAAAAGGAACAAAAAAAGTAGCAATCGTGATTTCCGTCGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTTTATACAAACACAGAGCAAAACACCCTGCGGACACACAGAAGCTAGTGTGTACTAACTCACAGAGGAATAATCACAATCAACAACAAGAAGATTCAAGTTCTAATGCTCCGGTAGTAGCTTCTAATTTTCTCTACATTGGAACGGTGGAACCTTCCAGAAGGTCAACAACGGTCAACGATCCGAACCAAACAGAGAAGCCTAACCGTTCGCCGTATCATAAACTGAATTCAGTTAAGCGATCTGATCGGTATAGGCCGAGTCCTGAATTACAGCCAATGCCGCCGTTGAGTAAACCTCCGGATGGAAACATACCGCCGGCGATGTCGCCGGAGTGTTCTTCCGATGAGGAGAGTAACGAAACCGCGTTTCATTCGCCGCAGAATTCGTCGTTAAGTCAGGAAGATGGATTTTACACGCCGTTTTCAGTTTCGCGTCAGAGTTCTCTTGCTAACGGTAGTCCGGCGAAGAGAGAGAATCAGTCGACGGTGACGCCTCTTCCGTTATCGAAAAGAACTTCGCCGAAATCTCGTCTTAACGCTAATTCACCGGATATTCGACACGTCATCATTCCGTCTATTAAACAGACTCCGCCTCCGCCACGTCAACAACCGGAAAAACTGTTAACCACCTCCGGAGGCGGTGGACATTCAAGAAAGCCAAAATTCTCAGCACCGCCACCACCTCCGAATTTGGCGCATCTTCAATCAACAACTAACACATTCTCAAACGTTTCTAAAACTTCACATAATCCTTCTCCTCCGCCACCACCACCACCGCCGCCTCCTCCTCTGCCAATTATTCGTAAATCAGTGTCTCCGATGCCGGCGATTTCAGGTGTTTCAGGTGGTGTTGATTCTGCTGGTAGTGTAACAAAAGTTTTAGACTCTGTTTCTGATGATGTTGATGAGAGTGTGAATTTGAGATCTTCTTCCGAGAGGTTTGAAGTTGAAGCCAATGAAACGGAAGGTGGAAAACCGAAGCTAAAAGCTTTGCATTGGGACAAAGTTCGTGCAACTTCAGACCGTGCTACTGTGTGGGACCAAATAAAATCAAGTTCATTTCAATTAAATGAGGATATGATGGAGTCCTTATTTGGCTGCAATAACAATGGAATGAATTCTTCTGCTACAAAACCAAAAGAACAAGGTGTTAGAAAATCAGTTCTTCCTAATTCTGTTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAAAATATAGCTATATTGTTAAGGGCATTGAATGTGACAAGAGATGAAGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAGTTGAAAAACTATGACGGCGATCTCTCAAAACTTGGATCTGCAGAAAAATTTCTTAAGGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCTATGCTATACCGAGCTAACTTTGATTCCGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTGCAGGCAGCAAGTGAGGAATTAAGGAATAGTCGGTTATTCTTCAAACTTCTTGAAGCTGTACTCAGGACAGGAAACAGAATGAATGTCGGCACTAATCGAGGTGATGCTAAAGCATTCAAATTAGACACACTCCTAAAACTCGTAGATATAAAGGGAACAGATGGAAAAACCACATTGCTCCACTTTGTTGTCCAAGAGATCATTAGGTCTGAAGGGGCAGAAACTGAATCTGCAAACGGAAATATTCCCGAACAAATGGAGTCCAAATTTAACGAGGAGCAGTTTAAGAAGAAAGGATTGCATGTTGTGAGTGGTCTCAGTAAAGACCTTGATAATGTTAAAAAAGCAGCAGGAATGGACTCAGATGTCTTGAGTGGCTATGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGGTTGGTTTTGCAATACGAGAAGCCAGATATGAGAGGGGATTTCTTCAAATCCACAAAGCTCTTTATGAAATACGCAGAAGACGAAATTGTGAGGATTAAGTCTCATGAAAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGAAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGACTTGGTTTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCCTTCAGAATAGCTTCAAATGCACCATTACCTGTTCTTAACAGGTACAACGGGAAACAAGATCGAAGCTCAGATGAGGAAAGCTCATCATCCCCTTAG 2718 0.4272 MKAHNSSFNIIIIIFSLSLSISVTTAKRINESDHHITRRILHQPLFPASSAPPPSPTVTPPPPSSSDNIPFFHEYPEGPPSDQNQATPITSNATAANPTPTQQPAKGTKKVAIVISVGIVTLGMLSALAFFLYKHRAKHPADTQKLVCTNSQRNNHNQQQEDSSSNAPVVASNFLYIGTVEPSRRSTTVNDPNQTEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPDGNIPPAMSPECSSDEESNETAFHSPQNSSLSQEDGFYTPFSVSRQSSLANGSPAKRENQSTVTPLPLSKRTSPKSRLNANSPDIRHVIIPSIKQTPPPPRQQPEKLLTTSGGGGHSRKPKFSAPPPPPNLAHLQSTTNTFSNVSKTSHNPSPPPPPPPPPPPLPIIRKSVSPMPAISGVSGGVDSAGSVTKVLDSVSDDVDESVNLRSSSERFEVEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNNGMNSSATKPKEQGVRKSVLPNSVDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAEKFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLQAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETESANGNIPEQMESKFNEEQFKKKGLHVVSGLSKDLDNVKKAAGMDSDVLSGYVTKLETGLEKVRLVLQYEKPDMRGDFFKSTKLFMKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGKQDRSSDEESSSSP 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00747 905 MobiDBLite consensus disorder prediction 181 401 - -
Trre9g00747 905 MobiDBLite consensus disorder prediction 886 905 - -
Trre9g00747 905 MobiDBLite consensus disorder prediction 45 108 - -
Trre9g00747 905 Pfam Formin Homology 2 Domain 452 853 IPR015425 -
Trre9g00747 905 MobiDBLite consensus disorder prediction 47 67 - -
Trre9g00747 905 PANTHER FORMIN-RELATED 18 898 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre9g00747 905 MobiDBLite consensus disorder prediction 181 202 - -
Trre9g00747 905 Gene3D Formin, FH2 domain 470 871 IPR042201 -
Trre9g00747 905 MobiDBLite consensus disorder prediction 219 237 - -
Trre9g00747 905 MobiDBLite consensus disorder prediction 380 400 - -
Trre9g00747 905 ProSiteProfiles Formin homology-2 (FH2) domain profile. 449 879 IPR015425 -
Trre9g00747 905 MobiDBLite consensus disorder prediction 80 106 - -
Trre9g00747 905 SMART it6_source 449 868 IPR015425 -
Trre9g00747 905 SUPERFAMILY Formin homology 2 domain (FH2 domain) 384 863 - -
Trre9g00747 905 MobiDBLite consensus disorder prediction 243 311 - -
Trre9g00747 905 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00747 Trre-Chr9 5562806 5566995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00747 434 894 FH2 protein (formin) Gene Family AT5G67470 68.534 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00747 - - gmx:100798670 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00747 9 5562806 5566995 Trre9g00747 9 5562806 5566995 ECH
Trre9g00747 9 5562806 5566995 Trre15g03696 15 45660185 45663722 PCT