Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00743 ATGGCTAACTTGGATGGCAATTCACTCCAGAATGCTAAGAAATCCATTCCGATTCCACCTCCTTCGCCTCAATCAGCAGCAACGGGTTATCCTTGCGAGTATGTGGTGATGAATAATTTAGCACAAAGAGGGCGAAACAGCTGTGTTTCTTCAGCAACAAGAGATTTATGGGAGCGTCTTTTCAATGATGGTTATAAAGCCGACGTTTGCATTAATACTGATAATGGTGGCATTGTTTATGCTCATTCTAACATTATTGGAGTGGCGTCTCCTGTATTGAGAGGCATGCTGAAGCAAGCAAATCGTTTCAATCGGTGGCGAACAATCTCAATCTCTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATACTTGTACTCTTCCTGTTATGAGCAAGAAGAAATGAAGGAATTTGTCCTACATTTGTTGGTGCTGTCACATGTATATGTGGTCCCTCACTTGAAGCGTGAATGTGAACAGAAGCTAGAAATGGGGTTACTCACTATAGATAATGTAGTTGATGTATTTCAACTTGCATTATTGTGTGATGCTCCGCGGCTAAGTCTCATTTGTCACCGTATGATAATAAAAAACTTCAAAACTGTTTCGGAGTCGGAAGGATGGAAAGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAATCAATGATTGAAGAAGAAAATAGTAAGAAGGAGAGGATCAGAAAAATGAATGAAAGACAGGTTTATCTGCAACTATACGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCGCATGATAAAGACTTTAAATCAAACCAACCGTGTAGGTATTCATCCTGCAAAGGGCTAGAATTGCTTGTTCGACATTTTGCTGGTTGCAAGTTGAGAGTCCCGGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTGTTGGAGCTGCATTCTCGTCTGTGTGCTGATCCTAATGTCTGTAGAGTTCCCTTGTGCAGGAACTTTAGGCAGAGAATAGCAAAACAAAGCAAAAAAGATGAAATTAGATGGAAAATATTGGTTGAAAAGATCTTAACTACAAGAGGAATTGGGATTGCATCGTGCTTTCGGAGACTATGA 1128 0.4122 MANLDGNSLQNAKKSIPIPPPSPQSAATGYPCEYVVMNNLAQRGRNSCVSSATRDLWERLFNDGYKADVCINTDNGGIVYAHSNIIGVASPVLRGMLKQANRFNRWRTISISGVPHDAVRVFIRYLYSSCYEQEEMKEFVLHLLVLSHVYVVPHLKRECEQKLEMGLLTIDNVVDVFQLALLCDAPRLSLICHRMIIKNFKTVSESEGWKAMKQSHPVLEKEVLESMIEEENSKKERIRKMNERQVYLQLYDAMEALVHICRDGCRTIGPHDKDFKSNQPCRYSSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPNVCRVPLCRNFRQRIAKQSKKDEIRWKILVEKILTTRGIGIASCFRRL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00743 375 Pfam TAZ zinc finger 252 335 IPR000197 -
Trre9g00743 375 Gene3D TAZ domain 242 363 IPR035898 -
Trre9g00743 375 MobiDBLite consensus disorder prediction 1 15 - -
Trre9g00743 375 FunFam BTB/POZ and TAZ domain-containing protein 2 169 239 - -
Trre9g00743 375 SUPERFAMILY POZ domain 47 163 IPR011333 -
Trre9g00743 375 Gene3D Potassium Channel Kv1.1; Chain A 38 167 IPR011333 -
Trre9g00743 375 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
Trre9g00743 375 Pfam BTB/POZ domain 60 164 IPR000210 GO:0005515
Trre9g00743 375 SUPERFAMILY TAZ domain 244 343 IPR035898 -
Trre9g00743 375 ProSiteProfiles Zinc finger TAZ-type profile. 241 338 IPR000197 -
Trre9g00743 375 Gene3D - 168 241 - -
Trre9g00743 375 SMART TAZ_2 244 336 IPR000197 -
Trre9g00743 375 SMART BTB_4 67 167 IPR000210 GO:0005515
Trre9g00743 375 MobiDBLite consensus disorder prediction 1 24 - -
Trre9g00743 375 FunFam BTB/POZ and TAZ domain-containing protein 3 46 166 - -
Trre9g00743 375 FunFam BTB/POZ and TAZ domain-containing protein 2 241 365 - -
Trre9g00743 375 Coils Coil 221 244 - -
Trre9g00743 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 39 371 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00743 Trre-Chr9 5538243 5540322 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Trre9g00743 BTB 1.9e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00743 - - lja:Lj2g3v1968190.1 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00743 9 5538243 5540322 Trre9g00743 9 5538243 5540322 ECH