Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00727 ATGCCTCCTTCCATTTCTCGTCTCTTCACTTCCCTTCCAAACCCTTCCAACTTCTCCACTTCATCCTCTTCTTCTTCTCACCAATATTCACACTTCCACTCACAACTCAAATTCCAATTCAAACCTTTTTCCACAAAATCATTCACCACCCATTTCCAGAACAAAAAGAATGAAGCACTTACGAAACTCAATGCATTGAACGAAGGAGTACAAGGAAGCATTGAAGAAGATGAACAATTCATTCGTTCGTTTCGTGAAGCTTGGCCTTACCTTTGGGCTTATCGTGGAAGCACTTTTGTTGTCATCATTTCTGGTGAAATTGTCGCTAGTCACTTGGATCCCATTCTAAAGGATATAGCTTTTCTTCATCACCTTGGAATTCGGTTTGTTCTTGTTCCTGGTACTCATGTGCAAATTGACAAGCTTTTGAAAGATAGAGGGAGCGAGCCTAAGTATGTTGGGAGATATAGAATAACTGATGATGAATCTTTAGAAGCTGCAATGGAAGCAGCAGGAGGAATAAGAATAATGATGGAAGCTAAACTTTCACCTGGACCTTCCATATGCAATATTCGTAGACATGGTGATAATAGTCGGTGGCATGAAGTTGGTGTTAGTGTTGCAAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCGGCGGAATTGATTATGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTGGATGGTGGTTGTATAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTGAATTGCAACACTTATGAAGTTGCCACAGCTTGTGCCTTGGCTATTGGGGCAGACAAGTTAATATGCATTATAGATGGTCCAATACTGGATGAGAATGCACGCCTAATTCGCTTCTTGCCTCTTGAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAATCCTGTTGAGCATAACAATACTAACGGGACAGTCAAATCTCCACCTAATGGAAAACGCATTACAGAATGGCATAATGCAACTTTCCACAATGGTGTTGGTTTTGAGAATGGAGATGGCTTAGGGAATTGCGAGCAAGGCTTTGCTATTGGAGGTCAAGAACGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCCTTCGTTTGCAGAGGCGGAGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTATTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTTGCTAGTGACCTTTATGAAGGCACTCGAGAGGCAGAGGAAAAAGATCTTTCTGGAATAAAACAAATTATTGAGCCTTTGGAGGCATTTGGCATACTGGTTAAGCGGACTGATGAAGAGCTGCTACAAACTTTGAAGAATTTCGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCCTGTGGTGCCCTTTTTCCTTACTTTGAGGAGAAGTCCGGAGAGGTTGCTGCTATTGCAGTATCTCCTGAGTGTCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCAGCATCGCTTGGATTGAATAAGCTTTTCCTACTTACAACACGTACGGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAAGCAAACAATCAACCTGTCCCGTAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAGAGTGGAATTACTGTTGGTGGAAACAAATTTCCTTCAAAATAA 1827 0.4149 MPPSISRLFTSLPNPSNFSTSSSSSSHQYSHFHSQLKFQFKPFSTKSFTTHFQNKKNEALTKLNALNEGVQGSIEEDEQFIRSFREAWPYLWAYRGSTFVVIISGEIVASHLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLKDRGSEPKYVGRYRITDDESLEAAMEAAGGIRIMMEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVGGIDYGSTGEVKKVDVTRMRERLDGGCIVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENARLIRFLPLEEADMLIRKRAEQSETAANYVKAVDEEGFNPVEHNNTNGTVKSPPNGKRITEWHNATFHNGVGFENGDGLGNCEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTREAEEKDLSGIKQIIEPLEAFGILVKRTDEELLQTLKNFVVVEREGQIIACGALFPYFEEKSGEVAAIAVSPECRGQGQGDKLLDYMEKKAASLGLNKLFLLTTRTADWFVRRGFSECSIDYIPEKKKQTINLSRNSKYYMKKLLPNKSGITVGGNKFPSK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00727 608 NCBIfam amino-acid N-acetyltransferase 399 591 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre9g00727 608 SUPERFAMILY Carbamate kinase-like 393 441 IPR036393 -
Trre9g00727 608 Pfam Amino acid kinase family 99 346 IPR001048 -
Trre9g00727 608 Hamap Amino-acid acetyltransferase [argA]. 75 591 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre9g00727 608 CDD AAK_NAGS-ABP 79 439 IPR033719 -
Trre9g00727 608 Gene3D - 78 444 IPR036393 -
Trre9g00727 608 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 445 593 IPR000182 GO:0016747
Trre9g00727 608 PANTHER AMINO-ACID ACETYLTRANSFERASE 24 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre9g00727 608 CDD NAT_SF 486 548 - -
Trre9g00727 608 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 448 594 IPR016181 -
Trre9g00727 608 Gene3D - 445 591 - -
Trre9g00727 608 Pfam Acetyltransferase (GNAT) family 484 550 IPR000182 GO:0016747
Trre9g00727 608 SUPERFAMILY Carbamate kinase-like 78 314 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00727 Trre-Chr9 5384222 5388993 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre9g00727 AA_kinase 9.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00727 K14682 - gmx:100777694 912.524