Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00640 ATGAATTTGGAGCCACCAAGAGGAACGGTAGAATCAATGTCACTCTTTAATGGATATTCTAAACAAGAACTAGGGATTCCGTTGATGGAAAATGGAGGCTCTAGTATTCTTGCTCGTCCCATGGGTAAGCGCTGCGCAGTTTCTGCATTTCGTGATTTTCCAGATGCATTTCGTGAATTAGGGATTCCGTTGATGGAAAATGGAGGCTCTAGTATTCTTGCTCGTCCCATGGTTAAGCGCTGCGCAGTTTCTGCATTTCGTGATTTTCCAGAAGCATTTCGTGAGTTTCTGCTCGTCCCAAAATCACATGGTGTGAATGTTCCTCCTCTTGGTCGTGAGAATGACCCAATGGCCCGGAATAAAGTGAGGAATGCATTGCGGCTGTTCGAAGATGTTTCTAGGAAGCTTTTGCAGGAAGCGGAAGCAAAAGCAAAGTCAAATGAGAAAGAAAGAAGGAGGTTTGATTTACAAGCTGCAAAAATACTTAAGGAGAAAGGGGACTATGTTAATGAAGGAGAAAAGATCTTGGGATCTGTCCCCGGGGTTGAAGTCGGGGATAAGTTTCATTACAGAGTAGAGCTTAATATAATCGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAGGTCAAAAATAAAATCCTTGCAACTAGTATTGTTGCGTCAGGGGGCTATTATGATGAATTAGATAATACTGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGTGCAGTGATAAAGACCCAGAAGATCAGAAGCTTGAAAGGGGCAATCTTGCTTTGAAGAACAGCAGTGAGGAAAAGAATCCTGTTCGGGTGATACGGGGTTCGGAATCCGTGGATGGAAAAAGCAAGATATATGTTTATGATGGACTTTATCTAGTTGAGTCATGTTGGCAGGAAATGGGGTCACATGGAAAGCTGGTTTATAAGTTTCGCTTGCGAAGAATCCCAGGTCAACCGGTGCTTGCCTTGAAGGAAGTGAAGCAATCTAAAAGAGGTTAA 1017 0.4297 MNLEPPRGTVESMSLFNGYSKQELGIPLMENGGSSILARPMGKRCAVSAFRDFPDAFRELGIPLMENGGSSILARPMVKRCAVSAFRDFPEAFREFLLVPKSHGVNVPPLGRENDPMARNKVRNALRLFEDVSRKLLQEAEAKAKSNEKERRRFDLQAAKILKEKGDYVNEGEKILGSVPGVEVGDKFHYRVELNIIGLHRQIQGGIDYVKVKNKILATSIVASGGYYDELDNTDVLIYTGQGGNVMCSDKDPEDQKLERGNLALKNSSEEKNPVRVIRGSESVDGKSKIYVYDGLYLVESCWQEMGSHGKLVYKFRLRRIPGQPVLALKEVKQSKRG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00640 338 Coils Coil 137 157 - -
Trre9g00640 338 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 111 329 - -
Trre9g00640 338 Pfam SAD/SRA domain 176 324 IPR003105 -
Trre9g00640 338 Gene3D - 159 338 IPR036987 -
Trre9g00640 338 SMART G9a_1 172 324 IPR003105 -
Trre9g00640 338 SUPERFAMILY PUA domain-like 161 331 IPR015947 -
Trre9g00640 338 ProSiteProfiles YDG domain profile. 177 320 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00640 Trre-Chr9 4535870 4537012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00640 104 325 Su(var)3-9 homologs AT5G04940 43.805 1.64e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00640 K11420 - tpra:123908193 422.165