Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00628 ATGGAACCTATGAGACTATTACTGATCTTAATTACTATTTTGTCCAATGTTCATACTCTAAGGAGTAGTAAACTTCTTGTTCATGAGTACTATAAGGAAAAATGTCCCTTAGCTGAAGAGATTGTGAGACATAACATGGCGGTAGCAGTTTTGAAAGATCCACGATTAGCAGCGTCGTTACTTCGATTACATTTTCATGATTGTTTTGTTATGGGGTGCGATGCATCGGTACTTCTAGACAGTGTTGAAGGCATGACAAGTGAGAAGCTAGCAGGGCCGAATGTGAACTCTTTGCGTGGATTTGAAGTCATTGATAAGATAAAGTATTTACTTGAAGAGGAATGTCCTCTCACCGTTTCATGTGCTGATATTCTAGCTATGGCTGCTCGTGATGCTGTTGAATTGAGAGGAGGACCAAGATGGGAAGTCTGGCTGGGGAGGAAGGATTCCCTTGAATCAAGTTTCAGTGGAGCCAACCTATTCATCCCTGCTCCAAATTCTTCTTTAGAGGCTTTAATTAATAATTTTAAGCAACAGGGTCTAGATATTGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTGTAAGTTTCAAGCAGAGGATCTACGAAACAAAACAGGAATATCACCATGGCTACGAATATGATCGCTACAAACGATACACAAACTTCAGAAGAATCCTACGATCCATATGTCCTGTTACCGGAAAGGACGACAAATTTGCACCCCTTGATTTTCAAACACCAAAAAGGTTTGATAACCATTACTTCATAAACATTCTTGAAGGAAAAGGATTGTTAGGTTCTGATAATGTTTTGATCGGCGAAGACTTGCATGGAATTATTAGGGAGCAGGTTTGGGGTTACGCCTCCAATGAAAAACTTTTCTTTGATTCATTTGCTAAGTCTATGATTAAGATGGGAAATATTAATGTTCTTACAGGAGATGAAGGAGAAATAAGAAGGAATTGTAGGTTTGTTAATCCATAG 1005 0.391 MEPMRLLLILITILSNVHTLRSSKLLVHEYYKEKCPLAEEIVRHNMAVAVLKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNVNSLRGFEVIDKIKYLLEEECPLTVSCADILAMAARDAVELRGGPRWEVWLGRKDSLESSFSGANLFIPAPNSSLEALINNFKQQGLDIEDLVVLSGSHTIGRARCVSFKQRIYETKQEYHHGYEYDRYKRYTNFRRILRSICPVTGKDDKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLIGEDLHGIIREQVWGYASNEKLFFDSFAKSMIKMGNINVLTGDEGEIRRNCRFVNP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00628 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre9g00628 334 Gene3D Peroxidase, domain 2 163 313 - -
Trre9g00628 334 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Trre9g00628 334 FunFam Peroxidase 29 167 - -
Trre9g00628 334 FunFam Peroxidase 163 312 - -
Trre9g00628 334 ProSiteProfiles Plant heme peroxidase family profile. 25 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 SUPERFAMILY Heme-dependent peroxidases 27 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 CDD secretory_peroxidase 26 332 IPR033905 GO:0004601|GO:0042744
Trre9g00628 334 Gene3D - 30 333 - -
Trre9g00628 334 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00628 334 PANTHER PEROXIDASE 72-RELATED 24 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00628 Trre-Chr9 4427603 4429160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00628 85 333 Peroxidase AT2G35380 67.068 1.28e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00628 K00430 - gmx:100778051 577.015