Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g00599 | ATGAAGTGTTTTTTCTTCAAACATAAATCAAAATCAGACCCAGATTTAAACCATAAAAAGAAGAAAAATCATGTATCAAAAAAATCTACAAGTGCTCATTCATCACCAAGGAGTATAAAAGAGTTGTACAAAGAGAAAGAACACAATTTCAGAGTTTTTACTCCAAGGGAGCTTATAAATGCAACAAATGGTTTCAATAAAGTGCTTAAAATTGGAGAAGGAGGTTTTGGTAAAGTATATAGAGGAACAATTACTCCTGAAAATGGAATTGGTAACTCAATTGTTGTTGCAATAAAAAAACTCAACACTCGTGGATTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGAATTGTGAATCATCCAAATTTGGTTAAGCTTTTGGGATATTGTTCTGTTGATGGTAAAAATGGAATCCAACGGTTGTTAGTGTATGAGTTTATGCCTAATAGGAGTTTAGAAGATCATCTTTTCAGTCGTTCTTTACCTCTTTTGCCTTGGAAAACAAGATTACAGATCATGCTTGGTTCTGCTCAAGGATTACAGTATCTACATGAGGGATTGGAAATTCAGGTGATCTATAGAGATTTCAAATCATCAAATGTGTTGTTGGACAAGAATTTCCATCCTAAGCTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACAGGTGACAACACTCATGTCTCTACTGCGGTAGTTGGGACAAGGGGATATGCTGCACCAGAGTATATTGAAACAGGTCATCTAAAATCAAAGAGTGATGTTTGGAGTTTCGGTGTAGTATTGTATGAGATTCTCACAGGAAGACGAACAATTGAAAGAAATCTTCCGATAGCGGAACAAAAGCTTATAGAATGGGTTAAAAACTACCCTGCTGATACTAGCAGATTCAGTTTGATTATAGACCCTCGACTCGCGAAACAATATTCTCTTGATTCAGCTAGGAAAATTGCTAAGTTGGCAGATAGTTGCTTGAAGAAAAATGCTGAAGATAGGCCTTCAATGAGTCAAGTAGTGGAAAGTTTGAAAGAAGCATTGGAATGTTCATAA | 1062 | 0.3625 | MKCFFFKHKSKSDPDLNHKKKKNHVSKKSTSAHSSPRSIKELYKEKEHNFRVFTPRELINATNGFNKVLKIGEGGFGKVYRGTITPENGIGNSIVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGKNGIQRLLVYEFMPNRSLEDHLFSRSLPLLPWKTRLQIMLGSAQGLQYLHEGLEIQVIYRDFKSSNVLLDKNFHPKLSDFGLAREGPTGDNTHVSTAVVGTRGYAAPEYIETGHLKSKSDVWSFGVVLYEILTGRRTIERNLPIAEQKLIEWVKNYPADTSRFSLIIDPRLAKQYSLDSARKIAKLADSCLKKNAEDRPSMSQVVESLKEALECS | 353 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g00599 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g00599 | 353 | CDD | STKc_IRAK | 71 | 348 | - | - | |
Trre9g00599 | 353 | PANTHER | OS01G0588500 PROTEIN-RELATED | 26 | 348 | - | - | |
Trre9g00599 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 346 | IPR011009 | - | |
Trre9g00599 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 70 | 346 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g00599 | 353 | ProSiteProfiles | Protein kinase domain profile. | 65 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g00599 | 353 | ProSitePatterns | Protein kinases ATP-binding region signature. | 71 | 100 | IPR017441 | GO:0005524 | |
Trre9g00599 | 353 | PIRSF | ILK | 15 | 353 | - | - | |
Trre9g00599 | 353 | FunFam | PTI1-like tyrosine-protein kinase 3 | 151 | 352 | - | - | |
Trre9g00599 | 353 | MobiDBLite | consensus disorder prediction | 8 | 38 | - | - | |
Trre9g00599 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 150 | - | - | |
Trre9g00599 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 352 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g00599 | Trre-Chr9 | 4274262 | 4276373 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g00599 | 3 | 346 | Glycoside Hydrolase | AT3G07070 | 42.577 | 1.38e-93 | 283 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Trre9g00599 | PK_Tyr_Ser-Thr | 5.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g00599 | - | - | gmx:100305390 | 568.54 |