Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00593 ATGATGGAGAAGCAACGTTACGAGATAGTGAATCAAAAGCTTGGTTCTGGCAACTATGGTGTCACTAAGTTGGCCAAAAACACCAAAACAGGAGAACTTGTAGCTATCAAATACATTCCAAGAGGACATAAGATTGATGAGAATGTTGAAAGAGAGATAGTTAATCATAGATCTTTAAGCCATCCACATATCATCAAATTCAAAGAGGTGTTTGTGACACCAACACATTTAGCTATTGTTCTTGAGTATGCTTCCGGCGGTGAACTTTTTACTAGGTTGTGCACTGCCGGTCGATTTAGTGAAATTGAGGCAAGATATTTCTTTCAACAAGTAATATCTGGAGTCTACTACCTTCATTCCATGGTATATATATGCACACTCAGAATTATCCAACTCCTAGACTCAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTTTACTGCACTCTAGCTCAACCCAAATCAATGGTTGGAACTCTTATATACAATGCACCAGGGGTTTTGGCTAGACGGGAGTATGATGAAAAGATTGCAGATGTTTGGTCATGTGGTGTTATTCTCTATGTCATGTTAGTTGGAAGATACCCATTTGATATTGATGATCGAAATGATCCTAAATATTCCACAAAGGTTATGAAGGTGGGCTATTGA 651 0.3825 MMEKQRYEIVNQKLGSGNYGVTKLAKNTKTGELVAIKYIPRGHKIDENVEREIVNHRSLSHPHIIKFKEVFVTPTHLAIVLEYASGGELFTRLCTAGRFSEIEARYFFQQVISGVYYLHSMVYICTLRIIQLLDSKFVTLVSPSLLYCTLAQPKSMVGTLIYNAPGVLARREYDEKIADVWSCGVILYVMLVGRYPFDIDDRNDPKYSTKVMKVGY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00593 216 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Trre9g00593 216 SUPERFAMILY Protein kinase-like (PK-like) 6 201 IPR011009 -
Trre9g00593 216 PANTHER SERINE/THREONINE KINASE 5 211 - -
Trre9g00593 216 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Trre9g00593 216 ProSiteProfiles Protein kinase domain profile. 8 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00593 216 Gene3D Transferase(Phosphotransferase) domain 1 84 214 - -
Trre9g00593 216 Pfam Protein kinase domain 153 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00593 216 Pfam Protein kinase domain 11 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00593 216 FunFam Maternal embryonic leucine zipper kinase 2 216 - -
Trre9g00593 216 FunFam Aurora kinase A 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00593 Trre-Chr9 4237438 4240525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00593 6 198 CBL-interacting serine-threonine protein kinases AT2G26980 39.512 1.38e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre9g00593 Pkinase 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00593 K14498 - gmx:100782714 249.595