Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00592 ATGGAGGACCAACGTTACAAGGTAATCAAAGACCTTGGTTCTGGAAACTTTGCTCTGACCAAATTGGCCCAAAACATCAAAACTGGAGAACTTGTTGCTATCAAGTACATTCCAAGAGGAGATAAGGTTAATGAGAATGTTGAAAGAGAGATAATTAATCATAGATCTTTAAGCCATCCAAATATCATCAAGTTCAAAGAGTTATTTGTGACACCATCTCATTTGGCAATTGTCCTTGAGTATGCTGCTGGTGGTGAACTTTTTCATTGGATAACCCATAGGGGTCGCCTTAGTGAACCTGAGGCAAGATATTTCTTTCAGCAACTAATATCTGGAGTCCAATACATTCATTCCATGCAAATTTGTCATAGGGATTTGAAATTGGAGAACACTCTATTGGATGATCTGAGTGGAAATTCATCTCCTCGACTCAAAATTTGTGACTTTGGTTTCTCCAAGTCTGTTTTACTGCACTCTCGACCCAAATCAACAGTTGGAACTCCTGCATACATTGCACCAGAAGTTTTTTCTAGAAAGGAGTATGATGGAAAGACTTCAGATGTTTGGTCATGTGGTGTTATTCTTTATGTCATGATGGTTGGATCATACCCATTTGAAGATCCAGAAGATCCTAAAAATTTCAGAAAAATTATTAAGAAAATAATGGATGTGCAATACTCCATTCCCAACTATGTATATATGTCTGCAAACTGTAGGCAATTTCTCTCTAGAATTTTTGTTGCTAATCCAGCTAAGAGGATTACAATCTCAGAGATACAACAACACTCTTGGTTTATGCCCTACATGCCTGTAAAAATTGTTGATGCTGGTAGAATATATTACCATGAACCAAAAAATAATCAATTACCTAGGCTACAAAGTGTAGAAGAAATCATGGGGATCATACAAGAAGCAAGAACAACAATACCTAGGCCAAGTTCATGGAATGTTGCTGATGTTGATGGTGATGTTGATGGGAATGTTGAAGAGAAAATTGATGATGTTAATGGTGACTTTGTGAAAATGAAACTTGTGTGA 1038 0.369 MEDQRYKVIKDLGSGNFALTKLAQNIKTGELVAIKYIPRGDKVNENVEREIINHRSLSHPNIIKFKELFVTPSHLAIVLEYAAGGELFHWITHRGRLSEPEARYFFQQLISGVQYIHSMQICHRDLKLENTLLDDLSGNSSPRLKICDFGFSKSVLLHSRPKSTVGTPAYIAPEVFSRKEYDGKTSDVWSCGVILYVMMVGSYPFEDPEDPKNFRKIIKKIMDVQYSIPNYVYMSANCRQFLSRIFVANPAKRITISEIQQHSWFMPYMPVKIVDAGRIYYHEPKNNQLPRLQSVEEIMGIIQEARTTIPRPSSWNVADVDGDVDGNVEEKIDDVNGDFVKMKLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00592 345 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00592 345 Gene3D Transferase(Phosphotransferase) domain 1 82 270 - -
Trre9g00592 345 SMART serkin_6 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00592 345 PANTHER SERINE/THREONINE KINASE 4 287 - -
Trre9g00592 345 SUPERFAMILY Protein kinase-like (PK-like) 4 296 IPR011009 -
Trre9g00592 345 FunFam Serine/threonine-protein kinase SRK2A 82 273 - -
Trre9g00592 345 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Trre9g00592 345 ProSiteProfiles Protein kinase domain profile. 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00592 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Trre9g00592 345 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00592 Trre-Chr9 4229485 4232910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00592 5 275 CBL-interacting serine-threonine protein kinases AT4G24400 42.908 6.05e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre9g00592 Pkinase 8.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00592 K14498 - gmx:547797 448.743