Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00591 ATGGCTCGTAAAAACATCGAACCAAATGCTACTTTAATAAACCGTTTGATTCTTCTTTTGGTGTGTTTGGGTTCTTGTGGTTTGGTTTATGTTTTTCTCTCTTTGATAACTAGAAGTGGTTCTGTTTCTGAGCTTAGAACTGGGTCAACGTCTTCAATAGATTTGGTTGGTGAGAAAAATGTTGGTGGGTGTTGTAGAGGGATTGAAAATTTGGAACTTTGGGGTTCAGCTGTTAAATGGGGTTCTGATTTCAAATTCAATACTTCTGAAGAATGTTGCAATGCTTGTAAATCTATGTGTACTGGAAAAGATGGTCCTTGTCTTTGTGATACTTGGGTCTTTTGTGGTAATCCTCAAGCTTGTGGCTCAAAATTCGGCGAGTGTTGGTTGAAGAAACAAAAGGATAGCTTAGCTCCTGAGCAGCAAGAAAAAGCACCTCTTGGGGAGACAATTAGTTGGACTTCCGGTCTCATCTTTGGAAAAGGCGAGGGTATTATTGGATTGGAAACTGAACATGGAACCCTTCATATAAAACTTTTCCCTGATTGTGCTCCGCACGCAGTTGCCTATATTCTAGAGTTGTTGCCTATGCGCCATTGTGCAGGCTGTCAATTTTACCGTGCAGAGAGTCGAGGTCAATCATGGGATTCAGAAGGAAACCACATAAAAAATGCTGGTTTTGGTCCCCCATTTGCATTAATACAAGGGACATTAGAAGCACAAGGCACACCATTCAATAAACTTCCATTGGAAGACTGTCCAATCTTAAGAAGAGGCTCAGTTGCTTTGATTGGTTCTGGTCCAGAATTCTTTATTAGCCTAGCTGATCATTCAGAGTGGAAACAAGAATACACTGTCTTCGGTTCTGTTCTTCCGGAAGACATGAATGTTGCCGAGAAAATTGCTGCACTCCCCACATTACCTGATGTTTGGAACAACGTTAATGTGACCGTGTTGGAAAAACCCGTTCCTTTCTTGGTCAGAAGAATCAATAAAAACAGTCAAGATTGA 1011 0.4095 MARKNIEPNATLINRLILLLVCLGSCGLVYVFLSLITRSGSVSELRTGSTSSIDLVGEKNVGGCCRGIENLELWGSAVKWGSDFKFNTSEECCNACKSMCTGKDGPCLCDTWVFCGNPQACGSKFGECWLKKQKDSLAPEQQEKAPLGETISWTSGLIFGKGEGIIGLETEHGTLHIKLFPDCAPHAVAYILELLPMRHCAGCQFYRAESRGQSWDSEGNHIKNAGFGPPFALIQGTLEAQGTPFNKLPLEDCPILRRGSVALIGSGPEFFISLADHSEWKQEYTVFGSVLPEDMNVAEKIAALPTLPDVWNNVNVTVLEKPVPFLVRRINKNSQD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00591 336 PANTHER EXPRESSED PROTEIN 1 334 - -
Trre9g00591 336 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 168 310 IPR002130 GO:0000413|GO:0003755
Trre9g00591 336 Gene3D - 159 322 IPR029000 -
Trre9g00591 336 FunFam Predicted protein 161 324 - -
Trre9g00591 336 SUPERFAMILY Cyclophilin-like 161 318 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00591 Trre-Chr9 4225872 4228787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00591 161 291 U-box Gene Family AT5G67530 27.536 3.11e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00591 - - gmx:100820360 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00591 9 4225872 4228787 Trre9g00591 9 4225872 4228787 ECH