Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00569 ATGTGCCGGCAAAATTCTCCGGTGCATAATTCCGGTGATGAAGAAATTGCAGCTGATGAAAGTCTTTTGGTTTATTGCAAACCTGTTGAATTCTACAATATTCTCTATCGTCGTTCTCTTCATAATCCTACTTATCTTAGGAGATGTTTGCGCTATAAAATAAAAGCAAAGCGTAAAAGGAGGGTGCGAGCAGGAATTGTGATTTTCAACTATAGGGACTGTTACAACTTGCTACGAAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTGATGCAGTGTGCGAGCTTTAAGGGTTTGCGATTTCATCTTTGTGCATCACATGATCTATTCAACTTTGAGTTCTGGGTTACCGATGATTACCAAGCAGTGAACGTCTCTGTAAAAATTGACATATTGAGATCAGAGAATGTTGCTGATGGAGTAATTCCACAAACACAACCCTTCTTCTTCTGTTCAAGACCTCGGAAGCGTAGACCAAAAAGCTCTTTTAAAAATCAGAAGCACACCAATATAAAGTTCCTGAAGTTGGACTCACCAGAAGGCATGCAAAATGGGACTCTTCAGAAAGACGATGATATCATGTCATGCAAAGGGGAGAATATGTCTAGAGCATCTCACAGTGAGAAGAATTTGCAGAATGAAGGAAATGGTGGGGTAAAATTTGGTCCTGATCATCCTAGCACCATGGATTACACTGAGCATGTAGAATCTAGTTTTAACATTCAAGGTGTTTCAATTGCCATGCCCCAATCTTCGGAGGACCCTGAATGTAGCAAATCAGTATATAAAAGTGATGCTGCTCTGCCTACTAAAGCAAAGAAGTTAAATACGGACCGTTCAGACTCAAAAAACCGTATGCTCCTGCAGAAGAGGCAGTTCTTTCACTCACATAGAGTTCAGCCAATGGCATTAGAGCAAGTGTTATCAGACCGTGATAGTGAAGATGAAGTAGATGATGGCGTTGCTAACCTGGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAACTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTACTGGCTGATGGTCATGTTCCGTGGGCTTGTGAGGCATTTTCCAAGCTTCATGCAAAAGAGCTGATTTCATCCCAACCTTTATTTTGGTGTTGGAGATTATTCATGATCAAACTTTGGAATCATGGTCTACTTGATGCTTCGACAATGAATAACTGCAATATAATATTAGATAACTTCAAAAACGGGGGATCGGATACTGGCACAAATTGA 1287 0.4025 MCRQNSPVHNSGDEEIAADESLLVYCKPVEFYNILYRRSLHNPTYLRRCLRYKIKAKRKRRVRAGIVIFNYRDCYNLLRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTDDYQAVNVSVKIDILRSENVADGVIPQTQPFFFCSRPRKRRPKSSFKNQKHTNIKFLKLDSPEGMQNGTLQKDDDIMSCKGENMSRASHSEKNLQNEGNGGVKFGPDHPSTMDYTEHVESSFNIQGVSIAMPQSSEDPECSKSVYKSDAALPTKAKKLNTDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDGVANLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHAKELISSQPLFWCWRLFMIKLWNHGLLDASTMNNCNIILDNFKNGGSDTGTN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00569 428 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Trre9g00569 428 CDD ZnB-Zn_EMF2-like 13 134 - -
Trre9g00569 428 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
Trre9g00569 428 CDD VEFS-box_EMF2-like 291 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00569 Trre-Chr9 4089202 4095859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00569 1 68 C2H2 Transcription Factor Family AT5G51230 54.412 7.03e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00569 - - gmx:100807112 714.531