Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00526 ATGGGGTTGATGGAAGATGTGACATTAATTGGAGGGTTAATAGGAGTTCAATTTATATATGCTGGAAATGCTGAGTTAATGAGTTATTCAATGTCATTAGGAATAAGCCCTCTTACCATTGTCATTTTTACTTCCATTGCTACATTTCTTATTCTATTCCCAGCTGCTTTTTTTTTTGAAAGGAATAAATGGCCCAATAATTGCAGTTTAAAGTTTATGATGCAGATAGGTTTTCTTTCATTTGGAGGATTAGCTTTTCAGTCTTTATTCCTCAAAGGAATTAGTCTAACTTCGGCGGCAATGGGAACAGCTATGCCAAATCTTGCCCCAGGTCTTATCTTCGTCATCGCATGGACTGCTGGGTTAGAGAAAGTAAACTTAAGCAACAAGTATAGTAAATTAAAAATCTTAGGAACATTATTATGTGTAATGGGAGCTTTCACAATGAGCATAATGCAAAGCATTTCGGCTCCTGCAACCGAAAATGAGGCTCCACTTCCATCATCATCAACACCATCAGATACTCTCTTTGACGTGCAAAAGATCATTGGTTGCCTCTATCTAATGATTTCAGTTTTAATATTGTCAAGCAGTGTTGTCCTGCAGGCTTTTGCTCTCGGCGACTTTCCTGCACCGATGTCCTTGAGCGCAATGACGTCTTTGTTTGGAGGATTCATGACTGCAGTTGTTCAATTATTTCAAGGCGACGAACTTAAAGCTGGTTTGCAACTTGTGAGCTTCGGAGACTTGATAGGCTTTTCCGTTCTGGCTGGTGGAGTGAGTGGAATATCCCTAAGCTTCAATGGATGGGCACTTAAGAAGAGAGGACCAGTCTTTGTCTCTATGTTTAGCCCTATTGGGACAGTATGCTCAGTTATTTTCTCTGTATTTACTCTTGGAAACACTATTAATATTGGAAGCATTGTTGGTATGTTCCTTATGTTCAGTGGACTTTACATAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGTCGATGGTGGAGATGTCATTGAGAGTGAGTTTGATGCAGACAAGCCTCTCTTATGTTAA 1050 0.3962 MGLMEDVTLIGGLIGVQFIYAGNAELMSYSMSLGISPLTIVIFTSIATFLILFPAAFFFERNKWPNNCSLKFMMQIGFLSFGGLAFQSLFLKGISLTSAAMGTAMPNLAPGLIFVIAWTAGLEKVNLSNKYSKLKILGTLLCVMGAFTMSIMQSISAPATENEAPLPSSSTPSDTLFDVQKIIGCLYLMISVLILSSSVVLQAFALGDFPAPMSLSAMTSLFGGFMTAVVQLFQGDELKAGLQLVSFGDLIGFSVLAGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVFTLGNTINIGSIVGMFLMFSGLYIVLWAKGKEGYVDGGDVIESEFDADKPLLC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00526 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 326 - -
Trre9g00526 349 PANTHER WAT1-RELATED PROTEIN 13 328 IPR030184 GO:0016020|GO:0022857
Trre9g00526 349 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
Trre9g00526 349 Pfam EamA-like transporter family 15 150 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00526 Trre-Chr9 3782254 3784170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00526 3 332 Nodulin-like Gene Family AT5G47470 57.958 3.97e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00526 - - aprc:113870214 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00526 9 3782254 3784170 Trre15g03301 15 32468158 32471364 PCT