Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00522 ATGGCTAAGACTACTCTTTTCTATTTGTTGCATTTGCTTTTGATTTTCACTTGCATGTTGTTAAATGCAGGAATTGTTACATTAGGTGCACGCCATCATCACAATGCTACCTTCAACTATTTATCTTCTTCAAACTCTTCCGAGCACCACTGGATCGGACCTGTTGGTAACCGTGTAATAACAGTTGATATTAACGGTGGAGGCCAGTTTCAGTCCGTCCAAGACGCCGTCAATGCTGTCCCGGACAACAATACAATGAATGTGCTTATTCAAATAAGTGCTGGATGCTACAAAGAGAAGGTGGAGGTTCCCGTGACTAAACCGTACATAACATTTCAAGGAGAGGGAAGGGATGTAACGGTTATAGAATGGCATGATAGAGCTTCTGATCCTGGTCCCAATGGACAACAGCTTCGTACTTATCGAACTGCTTCTGTTACTGTCTTGGCCAACTATTTCTCTGCTAAGAATATCACCTTCAAGAATACAGCTCCGGCGCCAAAGCCAGGGATGGAAGGATGGCAAGCGGTTGCGTTTCGCATATCAGGGGACAAAGCATACTTTTCCGGCTGTGGCTTCCACGGCGCACAAGACACACTTTGTGATGATGCTGGTAGGCATTATTTCAAGGAATGCTACATTGAGGGCTCCATTGATTTCATTTTTGGAAATGGCAGATCCATGTACAAGGATTGCGAGCTACATTCAATAGCCACGAGGTTTGGATCGATAGCAGCCCATGATAGGAATTACCCATATGAGAAGACAGGATTCGCATTCGTACGATGCAAAGTGACGGGTACAGGCCAACTATATGTGGGCCGTGCAATGGGCCAATACTCGAGAATAGTCTATGCATACACATACTTCGATAATATAGTTGCACCCGGTGGTTGGGATGATTGGGACCATGCCAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCAGTACGTGGGGTATCATGGGCCCAAGAGTTGGATTTTAAATCTGCACATCCATTTATCAGGAAGAGCTTCGTCAATGGGAGACATTGGATCGCACCAACTGATGCTTAG 1086 0.453 MAKTTLFYLLHLLLIFTCMLLNAGIVTLGARHHHNATFNYLSSSNSSEHHWIGPVGNRVITVDINGGGQFQSVQDAVNAVPDNNTMNVLIQISAGCYKEKVEVPVTKPYITFQGEGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVLANYFSAKNITFKNTAPAPKPGMEGWQAVAFRISGDKAYFSGCGFHGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRNYPYEKTGFAFVRCKVTGTGQLYVGRAMGQYSRIVYAYTYFDNIVAPGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWAQELDFKSAHPFIRKSFVNGRHWIAPTDA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00522 361 FunFam Pectinesterase 55 358 - -
Trre9g00522 361 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
Trre9g00522 361 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 55 357 - -
Trre9g00522 361 SUPERFAMILY Pectin lyase-like 56 359 IPR011050 -
Trre9g00522 361 Gene3D - 56 361 IPR012334 -
Trre9g00522 361 Pfam Pectinesterase 60 352 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00522 Trre-Chr9 3749124 3752154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00522 10 361 Carbohydrate Esterase AT5G47500 71.831 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00522 - - cam:101501763 665.611