Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00494 ATGTCGGCTTACACAGACCAGGATCCCCGTCTTCACGGCATCAAAACTCAAATTCGTGTCGTCCCCAATTTTCCTAAATCCGGTATCATGTTCCAAGACATTACCACTCTTTTGCTGGATCCCAAAGCTTTTAAGGACACAATTGACTTGTTCGTTGAACGATATAAGGGCAAAAATATTTCTGTTGTTGCAGGAATCGAAGCTCGAGGATTTATTTTTGGTCCTCCCATTGCCCTGGCAATAGGAGCAAAGTTTGTACCCTTAAGGAAACCGAAGAAATTGCCTGGCAAAGTAATATCTCAAGAATATATTCTGGAATATGGAAGGGATTGTCTTGAGATGCATGTTGGAGCTGTTGAAGCTGGTGAACGTGCTATTGTGGTTGATGATTTGATTGCAACTGGTGGAACACTTGGTGCAGCTATGGATTTACTAGAACGTGTGGGAGCAGATGTAGTAGAGTGTGCATGTGTCATTGAATTACCAGAACTTAAGGGCCGTGAACGTTTAAATGGGAAGCCCTTGTACGTGTTGGTAGAATACTTCGATATTTGA 555 0.4252 MSAYTDQDPRLHGIKTQIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERAIVVDDLIATGGTLGAAMDLLERVGADVVECACVIELPELKGRERLNGKPLYVLVEYFDI 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00494 184 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Trre9g00494 184 Gene3D - 2 181 IPR029057 -
Trre9g00494 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Trre9g00494 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre9g00494 184 CDD PRTases_typeI 48 180 IPR000836 -
Trre9g00494 184 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Trre9g00494 184 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Trre9g00494 184 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre9g00494 Trre-Chr9 3573790 3579101 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00494 1 180 PRT Gene Family AT1G27450 75.556 6.71e-97 276
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00494 K00759 - gmx:100306411 348.206