Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00466 ATGTACTATAAGGGTGACCCTAATAGTTTCATTGCGATGGAAAAGACTCTAGCCTTTTTTCAAGGAAAGGAACCTAATGGACTATTAACTGAATGGGTCATGTATGAGTACCGCTTAGAAACTATAATGAAGCTGAAAGTAACACTCTTCAGACTCAGGAAGAAACAATGGTTTACCAGGTCCAGCAGCAGCAGTGGAGGAGAGCAATCAAAGGATTGGCCAGTACTAGACACATTTGTTGTTGTTAGAAAATTTCAAACCATGAATTCATGA 273 0.3919 MYYKGDPNSFIAMEKTLAFFQGKEPNGLLTEWVMYEYRLETIMKLKVTLFRLRKKQWFTRSSSSSGGEQSKDWPVLDTFVVVRKFQTMNS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00466 90 SUPERFAMILY NAC domain 8 41 IPR036093 GO:0003677|GO:0006355
Trre9g00466 90 ProSiteProfiles NAC domain profile. 1 55 IPR003441 GO:0003677|GO:0006355
Trre9g00466 90 Gene3D NAC domain 2 88 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00466 Trre-Chr9 3356961 3357441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00466 8 41 NAC Transcription Factor Family AT1G12260 55.882 2.90e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00466 - - tpra:123909901 65.0846