Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00439 ATGAAGCTTGCATTGCTTGTTGGTCTCATTTTCATTCTCTGCAGCATCAACCAAATTACATCAGTACTTGCTGCAGAGGTGAATCAAGAACATGATGATCAGAACTTAATGACATACATTGTACATGTCAAAAAATCAGAAAATGTTGCTTCTTTTAAATCAGAAGATTTCCATAACTTTTATCATTCATTTCTACCTCAAACTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACCGCAATGTAGCCTCTGGATTCGCAGTGAAGTTGACACCAGAAGAAGCCAAATCTCTTCAAGAAAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCATACTCCAACTTTCTTGGGGCTCAAACAAGGACAAGGATTGTGGAGTGATGATAACCTTGGAAAAGGCGTCATCATTGGAGTCATAGACACAGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCACCACCACCTGCAAAGTGGAACGGACATTGCGAATTCACCGGAGAAGCAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGTCAAAAGTGCACTTCAAGAACCACCATTAGAAAATTTCTTCCATGGAACACACACTGCTGCTGAGGCTGCGGGAAGATTCGTAGAGGATGCAAGTGTTTTTGGAAATGCTAACGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTAATGACAAAATCGGATGCACCGAAAGTGCTATTTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTCTCTCTTGGTTTAGGTTCTCTTTCATTTTTTGAAGACCCTATTGCAATTGGTGCTTTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAACTCCGGCCCCGAATACAGTACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTTGGTGCTAGCACAATTGACAGAAAAATTGTAGCATTAGCAAAGCTCGGAAATGGAGATGAATTTGAAGGTGAAACATTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTTTATGCAGGTTCAAATGGAATTTCAGACCAGAACCAGAATCAGTCCTTCTGTCTTCCAGGTTCCTTAAAGAACATTGATGTAAGAGGCAAAGTAGTGTTGTGTGATGCAGGTGGAGGTGTTACACGTGTTGTCAAAGGACAAGAAGTTCTAAATTCAGGAGGTGCGGCAATGATCCTTGCAAACACAGAAGCTCTTGGATTCAGCACTTTCGCTATTGCTCATGTTCTTCCAGCAAGTGATGTGAGTTATGCAGCTGGTTTAACAATAAAAAATTACATAAACTCAACCTACAATCCAACCGCAACAGTACTATTCAAAGGAACCGTAATCGGTGATTCACTTGCTCCATCAGTTGCTTCATTTTCTTCTAGAGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATTGGACCGGGCGTCAACATTCTAGCTGCTTGGGCTATTTCTGTCGACAACGAACTCCCACCTTATAACATTATTTCCGGTACTTCAATGTCTTGTCCTCATCTAAGTGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCACCGGCTGCTATTAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGTGGTACTGCTATAACGGATCAAAGACTTTTACCTGCTGATGTTTTCGCTACTGGTGCGGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTATTTATGATATTCAACCTGCAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCCGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTATGATGTGAGAAGTATACCAGAAGCACAACTGAACTATCCGTCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCAGTAAATGCTACTTATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTAAATCCTAGTGAAATAACATTTACTGAGGTCAATGAGAAAGTTAGTTTCTCAGTAGATTTTATACCACAAGTTAAGGAAAATAGAGGGAACCATACTCTTGCTCAGGGTTCTCTCACATGGGTATCTGATAAACATGCTGTTAGGATCCCCATATCTGTGATTTTCAAGTGA 2253 0.4026 MKLALLVGLIFILCSINQITSVLAAEVNQEHDDQNLMTYIVHVKKSENVASFKSEDFHNFYHSFLPQTFAHKERMVFTYRNVASGFAVKLTPEEAKSLQEKGEIVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWNGHCEFTGEATCNNKLIGARNLVKSALQEPPLENFFHGTHTAAEAAGRFVEDASVFGNANGVAAGMAPNAHIAMYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLSFFEDPIAIGAFAATQKGVFVSCSAANSGPEYSTLSNEAPWILTVGASTIDRKIVALAKLGNGDEFEGETLFQPKDFSQQLLPLVYAGSNGISDQNQNQSFCLPGSLKNIDVRGKVVLCDAGGGVTRVVKGQEVLNSGGAAMILANTEALGFSTFAIAHVLPASDVSYAAGLTIKNYINSTYNPTATVLFKGTVIGDSLAPSVASFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTAITDQRLLPADVFATGAGHVNPVKANDPGLIYDIQPADYVPYLCGLGYSDKEIEVIVQWKVKCYDVRSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVDFIPQVKENRGNHTLAQGSLTWVSDKHAVRIPISVIFK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00439 750 Gene3D - 334 479 - -
Trre9g00439 750 Pfam Fibronectin type-III domain 649 747 IPR041469 -
Trre9g00439 750 Gene3D - 619 749 - -
Trre9g00439 750 ProSiteProfiles Serine proteases, subtilase domain profile. 123 602 - -
Trre9g00439 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
Trre9g00439 750 Gene3D Peptidase S8/S53 domain 141 615 IPR036852 GO:0004252|GO:0006508
Trre9g00439 750 SUPERFAMILY Subtilisin-like 115 606 IPR036852 GO:0004252|GO:0006508
Trre9g00439 750 Pfam PA domain 366 456 IPR003137 -
Trre9g00439 750 CDD PA_subtilisin_like 342 471 - -
Trre9g00439 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 747 IPR045051 -
Trre9g00439 750 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 144 155 IPR023827 -
Trre9g00439 750 CDD Peptidases_S8_3 115 569 IPR034197 -
Trre9g00439 750 Pfam Subtilase family 139 571 IPR000209 GO:0006508|GO:0008236
Trre9g00439 750 FunFam subtilisin-like protease SBT1.5 334 478 - -
Trre9g00439 750 Pfam Peptidase inhibitor I9 38 116 IPR010259 -
Trre9g00439 750 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Trre9g00439 750 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Trre9g00439 750 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00439 Trre-Chr9 3168452 3170704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00439 11 750 Subtilisin-like Serine Gene Family AT1G04110 42.803 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00439 - - gmx:100783595 1184.47