Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00438 ATGAAGCTTGCATTACTTGTTGGTCTCATTTTCATTCTCTGCAGCATCAACCAAATTACATCAGTACTTGCTGCACAAGATGATGATCAGAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTTTTCAATCAGAAGATTTCCATAACTTTTATCATTCATTCCTGCCACAAACTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACCGCAACGTAGCCTCTGGATTCGCAGTGAAGTTGACACCAGAAGAAGCCAAATCTCTTCAAGAAAAAGGTGAAATTCTGTCAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCATACTCCAACTTTCTTGGGGCTCAAACAAGGACAAGGATTGTGGAGTGATGATAACCTTGGAAAAGGCGTTATCATTGGAGTCATAGACACAGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCACCACCACCTGCAAAATGGAAAGGACATTGCGAATTCACCGGAGAAGCAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGTCAAAAGTGCACTTCAAGAGCCACCATTCGAAAATTTCTTCCATGGAACACACACGGCTGCGGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTAATGACAAAATCGGATGCACCGAAAGTGCTATTTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTCTCTCTTGGTTTAGGTTCTCTTTCATTTTTTGAAGATCCTATTGCAATTGGTGCATTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAACTCCGGCCCCGAATACAGCACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTCGGTGCTAGCACAATTGACAGAAAAATTGTAGCATTAGCAAAGCTCGGAAATGGAAATGAATTTGAAGGTGAAACATTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTTTATGCAGGTTCAAATGGAATTTCAGACCAGAACCAGAATCAGTCCTTCTGTCTTCCAGGTTCCTTAAAGAACATCGATGTAAGTGGTAAAGTAGTGTTGTGTGATATAGGTGGAGGTGTTTCTAGTCTTCTCAAAGGACAAGAAGTTCTAGATTCAGGTGGTGTGGCAATGATCCTTGCAAACTCAGAAGCTATTGGATTCAGTACATTCGCTATTCCTCACGTTCTACCCGCTGTTGAAGTGAGTTATGTAGCTGGTTTAATAATCAAGGATTACATAAACACAACCTACAATCCAACAGCAACAGTACTATTCAAAGGAACGGTAATCGGTGATTCACTTGCTCCGACTGTTGTTTCATTTTCTTCTAGAGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCGGACATCATTGGACCGGGCGTCAACATTCTAGCCGCTTGGGCTATATCTGTCGACAACGAGCTCCCACCTTATAACATCGTTTCTGGTACTTCAATGTCTTGTCCTCATCTAAGTGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCACCGGCCGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGTACTCCTATAACGGATCAAAGACGTTTACCTGCTGATGTTTTCGCTACTGGTGCAGGACATGTTAATCCGGTTAAAGCAAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTATGGGTTATTCTGATAGAGAGATTGAAGTTATTGTTCAATGGAAAGTGAAATGTTCTGATGTGAAAAGTATACCAGAAGCCCAACTGAACTATCCGTCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCAGTAAATGCTACTTATAGAGTTGAACTTGATGTGCCTTTGGCTTTAGGAATGAGTGTTAGTCCTAGTGAAATAACATTTAGTGAGACTAATGAAAAGGTTAGTTACTCGGTCGATTTTATACCACAAGTTAAGGAAAATAGAGGTAACCATACTTTTGCTCAAGGTTCACTCACTTGGGTGTCTGATAAACATGCTGTTAGGGTACCTATTTCTGTGATTTTCAAGTGA 2241 0.4038 MKLALLVGLIFILCSINQITSVLAAQDDDQNLMTYIVHVKKSENVASFQSEDFHNFYHSFLPQTFAHKERMVFTYRNVASGFAVKLTPEEAKSLQEKGEILSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGEATCNNKLIGARNLVKSALQEPPFENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLSFFEDPIAIGAFAATQKGVFVSCSAANSGPEYSTLSNEAPWILTVGASTIDRKIVALAKLGNGNEFEGETLFQPKDFSQQLLPLVYAGSNGISDQNQNQSFCLPGSLKNIDVSGKVVLCDIGGGVSSLLKGQEVLDSGGVAMILANSEAIGFSTFAIPHVLPAVEVSYVAGLIIKDYINTTYNPTATVLFKGTVIGDSLAPTVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTPITDQRRLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGMGYSDREIEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELDVPLALGMSVSPSEITFSETNEKVSYSVDFIPQVKENRGNHTFAQGSLTWVSDKHAVRVPISVIFK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00438 746 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Trre9g00438 746 Gene3D - 330 475 - -
Trre9g00438 746 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Trre9g00438 746 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Trre9g00438 746 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre9g00438 746 Gene3D - 615 745 - -
Trre9g00438 746 CDD PA_subtilisin_like 338 467 - -
Trre9g00438 746 SUPERFAMILY Subtilisin-like 111 602 IPR036852 GO:0004252|GO:0006508
Trre9g00438 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Trre9g00438 746 ProSiteProfiles Serine proteases, subtilase domain profile. 119 598 - -
Trre9g00438 746 FunFam Subtilisin-like protease SBT1.5 137 345 - -
Trre9g00438 746 Pfam Fibronectin type-III domain 645 743 IPR041469 -
Trre9g00438 746 CDD Peptidases_S8_3 111 565 IPR034197 -
Trre9g00438 746 FunFam subtilisin-like protease SBT1.5 330 474 - -
Trre9g00438 746 Pfam Subtilase family 135 571 IPR000209 GO:0006508|GO:0008236
Trre9g00438 746 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 151 IPR023827 -
Trre9g00438 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 743 IPR045051 -
Trre9g00438 746 Gene3D Peptidase S8/S53 domain 137 611 IPR036852 GO:0004252|GO:0006508
Trre9g00438 746 Pfam PA domain 362 451 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00438 Trre-Chr9 3160713 3162953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00438 23 743 Subtilisin-like Serine Gene Family AT5G67360 44.652 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00438 - - gmx:100783595 1196.8