Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00437 ATGACCTTAACTAAAATGGAACTAACTCCAATACTATTGATTCTTTGTTTCATTCTTGTGCTAAGTATCTATCCGACTTCAGCACATAATAAATACCAAGAATTCATAGCAGCAAATGAACAACTTGAAGATGATAGTAACTTATTGACTTACATTGTTCATGTCAACAAGCCTTCTCTTCAATCTGAGGAGAGTTTGCATGGTTGGTATTATTCACTCTTGCCAGATACTACTAAAACTCAAAACCAAAAACGCGTTATTTTCTCATACCGAAACATAGTTGATGGATTTGCGGTGAAATTGACTGCGGAAGAAGCCAAGGCTCTAGAAGAGAAGGAGGAGGTTCTGTCAACTCGACCGGAGAAAATCTTTTTGTTACACACAACTCATACTCCGAGCTTCTTGGGGTTGCAGCAGAATCAAGAATTGTGGCAAAATTCCAATCTCGGTAAAGGGATCATAATTGGAGTACTGGACACAGGAATACACCCTTTGCATCCTTCTTTTTCCGACGAAGGAATGTCGCCTCCACCTGCAAAATGGAATGGTCATTGTGAATTCACAGGGAAGAGGATTTGTAACAATAAGCTCATTGGAGCGAGGAACTTTGTGAATTCATCCCTCCCGTTTGATGATGTTGGACACGGAACTCACACGGCTAGCACAGCCACCGGAAGGTCCGTGCAAGGTGCCAATGTCTTTGGAAATGCTAATGGTACAGCAACTGGTATGGCACCATATGCACACTTGGCAATGTACAAAGTATGCGGCATCTATGGTTGTGCTGAAAGCACAATATTAGCTGGAATGGATGCTGCGGTTGATGATGGTGTTGATGTGCTTTCACTCTCCCTTGGAGGAAATTCCAGTTATTTATTTGAAGATGGAATTGCACTCGGCGCATTTAGTGCAATACAAAAGGGAATTTTTGTTAGTTGTTCGGCTGGAAATTCAGGTCCTGCTTATGGTACATTATTTAATGAAGCACCATGGATTCTAACTGTTGGTGCTAGCACAATTGACAGAAAAATAGAGGCAATAGCTAAGCTTGGCAACGGGAAGGAATATCTCGGAGAATCAGTTTTCCAACCAAATGACTTTGCATCAACATTATTGCCACTTGTGTATGCAGGTTCACTTAATACAACTGATGAATTCATTGCCTTTTGTAACCCTTTTTCCATGCAGAACGTCGATGTTAAGGGAAAGGTAGTTTTGTGTGAGCAAGGTGGATTTGTTAAAAGAGTAGATAAAGGTCAAGCGGTTAAAGATGCTGGCGGCGCTGCTATGATACTTGTTAACAGTAAAATTGAAGCTTTCAATCCAATTGCTGATGTTCATGTTCTACCTGCAGTTCATGTAAGTTACTATGCTGGTTTATCCATCAAAGATTATATAAACTCGACTTCAACGCCGGTAGCCACAATTATATTCAAAGGAACTGTTATTGGAAATCCACTAGCCCCTCAAGTTGCTTCATTTTCATCAAGAGGTCCAAGCAAATCAAGCCCTGGAATTCTGAAACCAGACATAATTGGACCTGGATTGAACATTCTAGCAGCATGGCCTGTATCGTTAGGCAATAATAGTACTACACCGCCGTTTAACATAATTTCAGGTACCTCAATGTCGTGTCCTCATCTCAGTGGCATTGCCGCGCTGTTGAAAAACTCTCATCCAGATTGGTCACCGGCTGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTTCATGAAAAGCATATTTTGGATGAAAGGCTTAAACCAGCTGATTTATTTGCAGTTGGTTCCGGACATGTTAACCCTTTGAAAGCGAACGATCCAGGACTTATTTATGATATTGAAACAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATAGACAAGTTGGAGTTATTTTGCAACAGAAAGTGAAATGTTCCGAGATAAAGAGCATACCACAGGCACAACTTAATTATCCATCATTTTCGATTATTTTAGGGTCTTCTTCACAGTATTATACTAGAACATTGACAAACGTTGGACCTGTTAACACAACTTACAATATGGTAATTGACGCGCCTTTAGCGGTCGGTATAAGTGTAGGACCGTCTCAAATAACATTCACTGAGGTGAAGCAAAAGGTTACATACACCGTTGATTTCGTACCCGAAGACGAAAAGATTAGAGGTGATAACATGATTGCTCAGGGGTCTATCAAATGGGTTTCTGGAAAGTATTCTGTTAGCATTCCTATATCTGTCATCTTTGTGTGA 2274 0.4019 MTLTKMELTPILLILCFILVLSIYPTSAHNKYQEFIAANEQLEDDSNLLTYIVHVNKPSLQSEESLHGWYYSLLPDTTKTQNQKRVIFSYRNIVDGFAVKLTAEEAKALEEKEEVLSTRPEKIFLLHTTHTPSFLGLQQNQELWQNSNLGKGIIIGVLDTGIHPLHPSFSDEGMSPPPAKWNGHCEFTGKRICNNKLIGARNFVNSSLPFDDVGHGTHTASTATGRSVQGANVFGNANGTATGMAPYAHLAMYKVCGIYGCAESTILAGMDAAVDDGVDVLSLSLGGNSSYLFEDGIALGAFSAIQKGIFVSCSAGNSGPAYGTLFNEAPWILTVGASTIDRKIEAIAKLGNGKEYLGESVFQPNDFASTLLPLVYAGSLNTTDEFIAFCNPFSMQNVDVKGKVVLCEQGGFVKRVDKGQAVKDAGGAAMILVNSKIEAFNPIADVHVLPAVHVSYYAGLSIKDYINSTSTPVATIIFKGTVIGNPLAPQVASFSSRGPSKSSPGILKPDIIGPGLNILAAWPVSLGNNSTTPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTANTLNLHEKHILDERLKPADLFAVGSGHVNPLKANDPGLIYDIETNDYVPYLCGLNYTDRQVGVILQQKVKCSEIKSIPQAQLNYPSFSIILGSSSQYYTRTLTNVGPVNTTYNMVIDAPLAVGISVGPSQITFTEVKQKVTYTVDFVPEDEKIRGDNMIAQGSIKWVSGKYSVSIPISVIFV 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00437 757 CDD Peptidases_S8_3 126 576 IPR034197 -
Trre9g00437 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 754 IPR045051 -
Trre9g00437 757 Gene3D - 626 756 - -
Trre9g00437 757 Gene3D - 341 484 - -
Trre9g00437 757 FunFam subtilisin-like protease SBT1.5 341 483 - -
Trre9g00437 757 Pfam Fibronectin type-III domain 656 754 IPR041469 -
Trre9g00437 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Trre9g00437 757 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Trre9g00437 757 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre9g00437 757 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 155 166 IPR023827 -
Trre9g00437 757 SUPERFAMILY PA domain 372 496 IPR046450 -
Trre9g00437 757 ProSiteProfiles Serine proteases, subtilase domain profile. 134 609 - -
Trre9g00437 757 Pfam Subtilase family 150 579 IPR000209 GO:0006508|GO:0008236
Trre9g00437 757 Pfam PA domain 373 461 IPR003137 -
Trre9g00437 757 Gene3D Peptidase S8/S53 domain 152 622 IPR036852 GO:0004252|GO:0006508
Trre9g00437 757 SUPERFAMILY Subtilisin-like 126 613 IPR036852 GO:0004252|GO:0006508
Trre9g00437 757 CDD PA_subtilisin_like 349 476 - -
Trre9g00437 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 127 IPR037045 -
Trre9g00437 757 Pfam Peptidase inhibitor I9 50 123 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00437 Trre-Chr9 3157212 3159485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00437 50 754 Subtilisin-like Serine Gene Family AT5G67360 45.975 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00437 - - gmx:100799902 1043.11