Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00408 ATGTGGGGTTTGTGTATTGGAGCATTGGTTATTATATGCATTATTACACATTGGGTTTATAGATGGAGAAATCCATGTTGCAATGGTAAACTCCCACCTGGTTCTATGGGTTTGCCACTTTTAGGTGAGACACTTCACTTTTTCTCTCCCAACACTTCTTCTGATGTTCCTCCATTCATCAAGCAGAGAATGAAAAGATATGGACCAATCTTCAAGACAAACTTGGTTGGAAGACCAGTTGTAGTGTCCACAGACCCTGATCTTAATTACTTCATATTCCAACAAGAAGGGAAAATATTTCAGAGCTGGTATCCAGATACATTCACAGATATATTTGGGAAACAAAATGTAGGTTCCTTACATGGTTTTATGTATAAGTACCTTAAAAGCATGGTGCTCAATTTGTTTGGTCCTCAAAGCCTTCAAAAGATGATCTCAGAGGTTGAACAAGCGGCCTGCAGAACATTACAACAATCGTCATGTCAGGACAGTGTTGAGCTGAAGGAAGCAACAGCAAGGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATTCAACCAAGTCCTCAGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTCATCTCATTCCCTTTGGACATTCCAGGAACAGCTTATCACAAATGTTTGCAGGGTAGGAAAAGGGCAATGAAAATGCTGAGGAACATGCTGCAGGAAAGAAGGGAAATGCCTAGAAAACAACAGACAGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAGAGGGAACAATGCTAACTGAAGCAATCGCTCTGGACCTCATGTTTGTGCTTCTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTTACTTATGCCATCAAACAACTCTCAGACAATCCCTTGGTGTTCAAGCAATTACAAGAAGAACATGAAGCCATCATCAAACGGCGTGAAAATCCTAACTCCGGAGTCACATGGCAAGAATACAAATCAATGAAATTTACATTTCAGCTCATAACTGAAACTGCGAGACTCGCAAATATAGTTCCAGGGATCTTCCGGAAGGCACTACGGGAAATTAATTTTAAGGGACATACTATACCAGCAGGCTGGGCAATTATGGTGTGTCCTCCAGCTGTACATTTGAACCCCGCAAAATATCAGGATCCTCTTGCCTTCAACCCAAGTCGATGGGAGGGAATGGAACCGAATGGTGCTACCAAACATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGACAGACTTCGCTAAGGTTCAGATGGCTGTTTTTCTTCATTGCTTGGTAACAAAATATAGGTGGCAACCCATCAAAGGAGGAAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCACGTCCAGATCACAGAGAAAGATCAAAGAAAGCACGAACCAGAATATACAATTACAAATTAG 1452 0.4056 MWGLCIGALVIICIITHWVYRWRNPCCNGKLPPGSMGLPLLGETLHFFSPNTSSDVPPFIKQRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTDIFGKQNVGSLHGFMYKYLKSMVLNLFGPQSLQKMISEVEQAACRTLQQSSCQDSVELKEATARMIFDLTAKKLISYDSTKSSENLRENFVAFIQGLISFPLDIPGTAYHKCLQGRKRAMKMLRNMLQERREMPRKQQTDFFDYVIEELRKEGTMLTEAIALDLMFVLLFASFETTSLALTYAIKQLSDNPLVFKQLQEEHEAIIKRRENPNSGVTWQEYKSMKFTFQLITETARLANIVPGIFRKALREINFKGHTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPSRWEGMEPNGATKHFMAFGGGMRFCVGTDFAKVQMAVFLHCLVTKYRWQPIKGGNIVRTPGLQFPNGFHVQITEKDQRKHEPEYTITN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00408 483 FunFam Cytochrome P450 family protein 23 469 - -
Trre9g00408 483 PANTHER CYTOCHROME P450 26 30 444 - -
Trre9g00408 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Trre9g00408 483 Pfam Cytochrome P450 32 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 SUPERFAMILY Cytochrome P450 28 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00408 483 CDD CYP90-like 63 469 - -
Trre9g00408 483 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00408 Trre-Chr9 2951280 2953785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00408 1 470 Cytochrome P450 AT1G12740 74.370 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00408 - - gmx:100812089 861.677