Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00333 ATGGAACAGAAAGGAATGCTGATATCTGCCTGCGTTGGGGTCGGAGTTGGAGTCGGCCTTGGTTTGGCTTCTGGACAAACCAAATGGGGGCCTAATGCTGTCTCCTCAAACGCCATCACACCCGAAAAAATTGAACACGAAATGCTTCGACTTATTGTTGATGGCAGAGAAAGCAATGTCACTTTTGATAATTTCCCTTATTATCTTAGTGAACAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCGGAGGTTTCTAAATATACACGGAATCTTGCTCCTGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAACTTTACCAACAGGTTCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCTAAGTTGCTTCTGTTTGATGTAACCGACTTTTCATTGAAGATTCAAAGTAGATATGGTTCATCCAACATAGAAAATTCTTTAAAAAGGTCTACTTCAGAGACAACCTTGGCTCGGTTATCTGACCTATTCGGGTCATTTTCCTTCTTTCCGCAAAGAGAAGATAATAAAGTTGCAGGCAAAATCCGCAGGCAAAGCAGTGGCGTAGACCTTCGACGGATGGAGGCTGAAGGATCTAGTAATCCTTCTAAGCTTCGTAGGAATGCATCAGCCTCTGGAAATATGAGCAGTCTTGGTTTGCAAAGCAATCCTACAAACTCAGCTTCTGGGAAGCACATAGTCAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGACTATTTACAAGGTTTTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATATCTGCGGGATGTTGATAAGTTGTTGGGTAGATCACAAAGGATATGTAAACTGTTCCAGACAATGTTAACAAAATTATCTGGACAAATTTTGATTCTTGGTTCAAGGGTTGTGGATTCTAGTAATGACTGCAATGAAGTAGATGATATGCTTACCTCCCTCTTCCCTTACGACATAGAAATCAAACCACCGGAAGATGAATCCCATCTGGTCAGCTGGAAGTCTCAATTTGAAGCGGATATGAAGAAGATACAGATTCAAGACAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGATTCCATCCGTGTAGAAGACGCAATGGTTCTCAGTAACTCTATAGAAGAGGTTGTCGTATCAGCGATTTCTTATCATTTAATGAATAGCAAAGAGCCTGAATACAGAAATGGGAAACTGGTTATTCCGTGCAATAGTTTGTCCCATGCTCTGGGTATATTCCAGGAGGGAAAACTCAGTGGAAGAGATACAATGAAATTAGAAGCTCAAGCAGTAACAGCTGAGCAGAGAGAAGAAGGAGCTGTTGTGAAACCAGAAGGAAAGTCTGAAAGTTCTGCTCCTGGTATAAAGACTGAAGCAGAAATACCAACTTCGGCGGCCAGAACTGACGGTGAAAATTCAGTTCCTGCCCCCAAAGCTGAAGTTCCTGACAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTAATACCAGCAAACGAAATTGGGGTAACATTCTCCGATATTGGTGCCTTAGAAGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCGGACCTTTTTGATGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCACCTGGCACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTTCGTGCTTTATTCACACTGGCAGCCAAAGTCTCCCCAACTATTATATTTGTTGATGAGGTGGACAGTATGCTTGGCCAGCGGACAAGAGTTGGGGAACATGAAGCCATGCGTAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGACCGCATCCTTGTCCTCGCTGCAACCAATAGGCCCTTTGACCTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGGGCTACCATCTGCGGAGAACCGGGAAAATATATTGAGGACCCTTTTGGCTAAAGAGAAGGTGGACGATGGACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATACAGTGGAAGTGATCTAAAGAACATATGCACAACTGCTGCTTATAGGCCTGTTAGAGAGTTAATTCAGCAAGAGATAAAAAAGGATTCGGAGAAAAAGAAGAAAGAAGCTGAAGGACAAGATGCTCAGGATGTAGAAGAAGTTGAACAGGAAAGAGTCATTAGCCTTAGACCTTTGAATATGCAGGACTTCAAAGTGGCAAAGAGTCAGGTTGCCGCAAGCTTTGCATCCGAGGGGGCTGGAATGAATGAGTTGAAGCAGTGGAATGACTTGTATGGCGAAGGTGGTTCGAGGAAGAAAGAACAACTATCTTATTTCCTATGA 2493 0.4292 MEQKGMLISACVGVGVGVGLGLASGQTKWGPNAVSSNAITPEKIEHEMLRLIVDGRESNVTFDNFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSNIENSLKRSTSETTLARLSDLFGSFSFFPQREDNKVAGKIRRQSSGVDLRRMEAEGSSNPSKLRRNASASGNMSSLGLQSNPTNSASGKHIVSWSFDEKLLIQTIYKVLVYVSKTYPIVLYLRDVDKLLGRSQRICKLFQTMLTKLSGQILILGSRVVDSSNDCNEVDDMLTSLFPYDIEIKPPEDESHLVSWKSQFEADMKKIQIQDNKNHIMEVLAANDLDCHDLDSIRVEDAMVLSNSIEEVVVSAISYHLMNSKEPEYRNGKLVIPCNSLSHALGIFQEGKLSGRDTMKLEAQAVTAEQREEGAVVKPEGKSESSAPGIKTEAEIPTSAARTDGENSVPAPKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVDDGLDFKELATMTEGYSGSDLKNICTTAAYRPVRELIQQEIKKDSEKKKKEAEGQDAQDVEEVEQERVISLRPLNMQDFKVAKSQVAASFASEGAGMNELKQWNDLYGEGGSRKKEQLSYFL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00333 830 Gene3D - 690 792 - -
Trre9g00333 830 MobiDBLite consensus disorder prediction 750 772 - -
Trre9g00333 830 MobiDBLite consensus disorder prediction 207 231 - -
Trre9g00333 830 MobiDBLite consensus disorder prediction 188 231 - -
Trre9g00333 830 ProSitePatterns AAA-protein family signature. 661 680 IPR003960 GO:0005524|GO:0016887
Trre9g00333 830 Gene3D - 517 799 IPR027417 -
Trre9g00333 830 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 829 - -
Trre9g00333 830 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 517 692 - -
Trre9g00333 830 Pfam ATPase family associated with various cellular activities (AAA) 558 688 IPR003959 GO:0005524|GO:0016887
Trre9g00333 830 Pfam AAA+ lid domain 712 753 IPR041569 -
Trre9g00333 830 SMART AAA_5 554 691 IPR003593 GO:0016887
Trre9g00333 830 SMART AAA_5 100 333 IPR003593 GO:0016887
Trre9g00333 830 MobiDBLite consensus disorder prediction 451 500 - -
Trre9g00333 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 757 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00333 Trre-Chr9 2399668 2405591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00333 518 748 Calmodulin-binding Proteins AT3G56690 38.462 9.66e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00333 - - gmx:100808011 1266.52