Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00329 ATGACTTCGAATACTACTTCTGGAAATGTTTGCCCGCAACCAATGAAGCCTGCATCTAATGGTGTATTTCAGGGAGATCACCCTCTTGATTATGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGACTGGCTTATCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTACATGCAGTTTTCCCACCCAAGAGTCTTCCAGTATTAGATACTCTAGCAAACCTTGGCCTTATATTCTTTCTATTTTTAGCAGGCATAGAGTTAGATCCCAAATCTCTTCGACAAACTGGAGGCCGAGTCCTTGCAATTGCCATGGTCGGAATAAGCCTACCCTTTGCATTAGGGATTGGTTCATCATTTGTTCTGAAAGAAACAATTGCCAAAGATGTAAATACTTCCGCATTTCTCGTATACATGGGAGTCGCTCTGTCTATAACTGCATTTCCTGTATTAGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACCAGTGTCGGACGGATGGCTATGTCGGCTGCAGCAGTTAATGATGTAGCTGCCTGGATTCTTCTTGCTCTGGCTGTTGCCTTATCCGGAAATACCCAATCTCCACTTGTGTCATTGTGGGTCTTCTTAAGTGGTACTGGTTTTGTCGTTTGTTCGATCCTCATCGTCCTTCCAATTTTCAAATGGATGGCCCAACAATGCCATGAAGGTGAGCCAGTCGATGAGTTGTACATATGTTCTACATTAGCTGCTGTTCTGGCTGCTGGATTTGTCACAGATGCTATTGGAATTCATGCCATGTTTGGCGCATTTGTTTTTGGAATTTTGATTCCGAAAGATGGACCATTTTCCGGTGCTCTTGTGGAGAAAATAGAGGATCTTGTGTCTGGTTTATTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATGTAGCCACCATTCAGGGGCTGCAGTCATGGGGTCTTCTAGTTTTCGTTACATTTACTGCTTGTTTTGGGAAGATTGTTGGGACTATTGTAGTGTCTCTTTTATGTAAAGTGTCTTTTAACGAGTCTGTAGTGCTTGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAAACCTTTGCCATTATGGTTCTCATGGCTCTCGTTACTACCTTCATGACCACTCCTCTTGTGATGGCTGTGTATAAGAGGAAAGAAAGAATATCTGATTACAAATACAAAACAATTGAAAGGAAAATTGCAGACAGCCAATTGAGGATTCTTGTCTGCTTCCATGGTGCAAGGAATATTCCATCAGTGATAAATTTGATTGAGACTTCAAGAGGAATCAAGAAGTGTGACGCACTTTGTGTGTATGCAATGCACCTTAAAGAATTTTCTGAGAGATCCTCATCAATACTAATGGTACAAAAGGTTAGAAAAAACGGATTGCCATTTTGGAATAAAGGTCACCGCTCAGATTCTGACCATGTTATTGTGGCATTTGAGGCTTACCAAAAACTAAGCCAAGTTTGTGTCCGGCCAATGATAGCAATCTCTGCGATAGCTAACATTCATGAAGACATATGTGCAACTGCTGAAAGAAAGAGAGCCGCAATCATCATTCTCCCATTTCATAAGCAACAAAGATTAGATGGTTCACTTGACATTACAAGAAATGATTTTCGATTGGTTAACAAAAGGGTACTCGAGCATGCACCGTGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGTGGTACATGTCATGTGTCTGCAAGTAATGTTTCTTATTGTGTTTCTGTGCTTTTCTTTGGCGGTGGTGATGACCGTGAAGCTCTTGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATAAGATTAGTGGTTATTCGTTTCTTAGTGGAAACTAATATTTTAGGGGAGATTACCAGAGTTGACGTTGGAGAATCATCCAGCGGTAAATCAATTTCAGAGGACGAGGAGTTCCTTGCGGAATTTAAGCTGAAAACAGCCAGTGATGAATCCGTTATCTATGAAGAGAAAATAGTAAAAGATGCTGCAGAAACAGTTGCTGCTATCCGTGAGTTTAATTCTTGCAATCTGTTTCTTGTGGGTCTAATGCCAACCGGTGAATTAGCCTGTGCTCTGGAAAGAAGCGACTGCCTGGAACTAGGACCTGTTGGTGGCTTGTTAGCATCCAACGATTTCCCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCGCAATGGAGTGCCGACAAATTTAGGCCCAGTAATGGAGGAACATTCACACAATGGAGATACAGAATCTGCCTAA 2406 0.4194 MTSNTTSGNVCPQPMKPASNGVFQGDHPLDYALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLPVLDTLANLGLIFFLFLAGIELDPKSLRQTGGRVLAIAMVGISLPFALGIGSSFVLKETIAKDVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNTQSPLVSLWVFLSGTGFVVCSILIVLPIFKWMAQQCHEGEPVDELYICSTLAAVLAAGFVTDAIGIHAMFGAFVFGILIPKDGPFSGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGLQSWGLLVFVTFTACFGKIVGTIVVSLLCKVSFNESVVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALVTTFMTTPLVMAVYKRKERISDYKYKTIERKIADSQLRILVCFHGARNIPSVINLIETSRGIKKCDALCVYAMHLKEFSERSSSILMVQKVRKNGLPFWNKGHRSDSDHVIVAFEAYQKLSQVCVRPMIAISAIANIHEDICATAERKRAAIIILPFHKQQRLDGSLDITRNDFRLVNKRVLEHAPCSVGIFVDRGLGGTCHVSASNVSYCVSVLFFGGGDDREALAYGARMAEHPGIRLVVIRFLVETNILGEITRVDVGESSSGKSISEDEEFLAEFKLKTASDESVIYEEKIVKDAAETVAAIREFNSCNLFLVGLMPTGELACALERSDCLELGPVGGLLASNDFPTTASVLVMQQYRNGVPTNLGPVMEEHSHNGDTESA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00329 801 PANTHER CATION/H + ANTIPORTER 10 778 - -
Trre9g00329 801 Gene3D - 35 439 IPR038770 -
Trre9g00329 801 FunFam Cation/H(+) antiporter 15 35 437 - -
Trre9g00329 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00329 Trre-Chr9 2376783 2379932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00329 5 800 Antiporter Super Family AT5G41610 67.162 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00329 K26731 - gmx:100810155 1241.1