Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00318 ATGGTTTTACGCGATGAAATTCAAATCAATCAACGACAATGTTGTTTGATCCACGACATATTCACTCTAGCATTCGACACAATCTCAGACGAGATAAGGCAGAATCTAAAGCTTGATGAAAGAGCTACCAAATGGAAACCTCTTGAATTTCCCCTCAGAGAGCTTTGTAGGGTTTTCAAAGAAGGTGAACTATATATCAAGCATTGTTTGGATTCAAAAGATTGGTGGGGGAAATCACTGACACTTTCTCAAAACCGAGACTGCGTCGAGTTTCACATCCATAACTTGCTTTGTTATTTCCCTGCGGTTATTGAAGCGATCGAGAGTGCTGGTGAGATGTCGGGTTTGGATCAAGATGAAAATTCAAAGAAGAAAGTTATGCTTGCAAGAAAATATGATGTGGAATGGAATGATCCAAAACTTTTTCAATGGAGATTTGGGAAACAGTATTTGGTTCCAAAAGAGATTTGCAACCAATTGGAGAATGCTTGGAGAGAAGATAGATGGAGGATCATAGAATCACTCAAAGAGAAAAAAGGTTCTTCCAAAATCACTTATTCAAAGAATGAGCAACATTTTGCTGATATGTTGTTGAAGAAACTATCGAATGGTTCAGAAAAAACCAATAATAGTAACAATAATAAGATTCTGTGGCCAATTGGAATTTTGTTAGGATCCAAAGATTACCAAGTGAGGAGAAGATTGGGAAGGGGAAAGCAATTTAAGGAAATTCAATGGTTAGGACAAAGTTTTGCTTTGAGGCATTTTGTTGGGGAAAGAGAAGCTTATGAAAATGAGATTTTCAATTTGTTATCACTTTCTCATCCTAACATATTGCAATATCTATGTGGCTTTTATGATGAAGAGAAGAAAGAGTTTTCACTTGTGATGGAGTTAATGAGCAAGGATTTATGCACATACATGAAAGAGAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTTGTGGTTGATCTCATGCTTCAAATGGCAAGAGGCATTGAATATCTTCACACCAAAAAAATTTACCATGGAAACCTTAATCCTTGTAATATCCTACTAAGAGCAAGAAACTCACAAGAAGGTTATTTTCAAGCAAAAGTTGTAGGATTTGGTTTGTCATCTGTGACGGATGGTGAAAACAATACTACTAGAACCTCGCCGACACATAACCCTATTGTTGAAGAGATTAACCCTTCAGTTTGGTATGCACCTGAGGTTTTAACTGAGCTAGAACAAATGAAAAATGCTTCGACTTCTTGCAAGTACTCGGAGAAAGCCGATGCATATAGTTTCGGTATGATATGTTTTGAGTTGTTGACAGGAAAAGTTCCTTTTGAGGATAACCATCTTCAAGGAGATAGGACTAGCCAAAATATCAAAGCAGGAGAAAGACCTTTGTTTCCATATCATTCGCCGAAATATCTTGTGAGTTTGATAAAAAAATGTTGGCAAACTGATCCGTCTCAGCGTCCTACTTTCTCGTCTATTTGTAGGATTTTGCGCTACACCAAAAAGTTTCTTTCAATGAACAGTGAATATGTTATGATCAATCCTGAACTCAATCAGGTTGAACTTCAAAACCCACCTGTAGATTGTTGTGACCTTGAAGGAATGTTCTTTAAAAGTTTTCCGATGGAAAGGACAAGTAACATGTCTTGTGTTTCACAAATACCTTATGAAATGTTTGCTTACAAAGTTGTTGAGAAAGGGAAGATCAATAATCAGAATCAGAGTAATACTCCTACTAAAGATAAGTGCTGTGAGTGTGAGCCAACAAAGGATGAGGTTATTATACATGGGGCAGAAACTGAACAAAGCACAGTTTGTAGAGATGCTAATGCATCCATAATGGAAGAACTAGTAACGTATCCCAAATCAATTTTTGGTGACACGCAGTCTAGTTCTTCTGATTCGCCACCAAGGAAGAGTGTTACAATAAAGACACCATTACCAATGAAGCCAAAGAAAGACCAAGGAACTCGAAAATTGCAAGCAACAAGATCGTTACCACCACCATTATCTGGTCGCATTTCCAGGACAAATAAGGTCAATCTGTCATCAATGACATCTAGCCCTCTAAGCCCAGGTAAAAGAAGCACTGCCAATGTCTCGTCAGAATCGGAGCGCAATAACAATATTAACAAAGGGAATCAATCACCATTAGTGTCAACTTCAAGCACAGCTAGAAGGAAATTATATGATGGAGGCAATGTATCAGATTCCAAGTCTAGTTTAAAGGTGAAAACAAGAGACCAATCACCATTTAACAGTGTAAAGACAAGGAAACCACAACTTCCTTTGAATCCTTCTTCGAGTCCGATAAGAATGAGACGTGTCAAAAGTACTAATAACACCACAAGTGTGAGGATGCAAAAAGGGTTCATTTCAACACCTCCAATGAGTCCTTCAAGGACATTCATAAGCAAAAAAGGCGGTAATGTTTCAGATATGGATACTGTTTTGAAGATACGAGGTAGATTGTCATCATATGGATTGAGTCCCTTGAGTCCATATGTGAGCAATCATAAGACTAAAAGAGAAAGCATGTCACCATTTACAATGTCCCCTTTGAGTCCGTATGTAAGAGCAACAACATGTGGTCATGTCTCGGATTAA 2625 0.3783 MVLRDEIQINQRQCCLIHDIFTLAFDTISDEIRQNLKLDERATKWKPLEFPLRELCRVFKEGELYIKHCLDSKDWWGKSLTLSQNRDCVEFHIHNLLCYFPAVIEAIESAGEMSGLDQDENSKKKVMLARKYDVEWNDPKLFQWRFGKQYLVPKEICNQLENAWREDRWRIIESLKEKKGSSKITYSKNEQHFADMLLKKLSNGSEKTNNSNNNKILWPIGILLGSKDYQVRRRLGRGKQFKEIQWLGQSFALRHFVGEREAYENEIFNLLSLSHPNILQYLCGFYDEEKKEFSLVMELMSKDLCTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHTKKIYHGNLNPCNILLRARNSQEGYFQAKVVGFGLSSVTDGENNTTRTSPTHNPIVEEINPSVWYAPEVLTELEQMKNASTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTSQNIKAGERPLFPYHSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSMNSEYVMINPELNQVELQNPPVDCCDLEGMFFKSFPMERTSNMSCVSQIPYEMFAYKVVEKGKINNQNQSNTPTKDKCCECEPTKDEVIIHGAETEQSTVCRDANASIMEELVTYPKSIFGDTQSSSSDSPPRKSVTIKTPLPMKPKKDQGTRKLQATRSLPPPLSGRISRTNKVNLSSMTSSPLSPGKRSTANVSSESERNNNINKGNQSPLVSTSSTARRKLYDGGNVSDSKSSLKVKTRDQSPFNSVKTRKPQLPLNPSSSPIRMRRVKSTNNTTSVRMQKGFISTPPMSPSRTFISKKGGNVSDMDTVLKIRGRLSSYGLSPLSPYVSNHKTKRESMSPFTMSPLSPYVRATTCGHVSD 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00318 874 FunFam Kinase family protein 226 516 - -
Trre9g00318 874 Gene3D Transferase(Phosphotransferase) domain 1 224 528 - -
Trre9g00318 874 Pfam Protein of unknown function (DUF1221) 4 226 IPR010632 -
Trre9g00318 874 MobiDBLite consensus disorder prediction 631 777 - -
Trre9g00318 874 SUPERFAMILY Protein kinase-like (PK-like) 227 527 IPR011009 -
Trre9g00318 874 Pfam Protein tyrosine and serine/threonine kinase 260 502 IPR001245 GO:0004672|GO:0006468
Trre9g00318 874 MobiDBLite consensus disorder prediction 631 646 - -
Trre9g00318 874 MobiDBLite consensus disorder prediction 666 777 - -
Trre9g00318 874 ProSiteProfiles Protein kinase domain profile. 229 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00318 874 PANTHER SERINE-THREONINE PROTEIN KINASE 253 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00318 Trre-Chr9 2274452 2277415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00318 228 519 MAP Kinase Kinase Kinase AT1G14000 30.619 9.56e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Trre9g00318 PK_Tyr_Ser-Thr 5.9e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00318 9 2274452 2277415 Trre9g00318 9 2274452 2277415 ECH