Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00180 ATGGACAACAAACCACATATAGCCTTAGCCAAACTTGCCAAAACTTATGGTCCGATACTTAGTTTAAAGCTAGGCCAAGTAACAACCATAGTTGTCTCTTCGGCCGACATGGCTAAAGAGATACTCCAAACTCATGATTCGTTACTTTCAGACCGAACTGTACCGCATGCTTTAACTGCTTTCAACCACGACCAATTTGGCGTGGGATTCCTTCCTCTTTCGCCACTCTGGCGAGAGATGAGAAGGGTATGCAAAAACCAACTATTCTCTAACAAGAGTCTTGATGCGAATCAATATCTTAGACGTCATAAGATAGATGAACTCATCAATTATGTTTCTCAATGTAGTCTAAAGGGTGAAGCAATAGATATTGGTAGTGTAGCTTTTAAGACTTCAATTAATTTGTTGTCAAATACTATTTTTTCTATAGACTTTGCTAATATCTCTGCAGGTACTAATGACAATAAAGAAAACAAAGATTTAGTTATTAATATGGCGAAGACAGTTGGAGTGCCGAACATGTCTGATTTTTTCCCATTGTTGAGGTTGATTGATCCACAAGGCATAAAAAAAACCTATCTATTTTATATTGGAAAGTTGTTCAGTGTCTTCGACAACATAATCGACCAAAGGTTGAAGTTGCGAAATGCGGATGATTTTGTCACCAACAATGACATGCTAGACTCCTTGCTCAGTCTTTTAGAAGAAAATCCAAAGGAGATGGACAAAGAAAAAATGGAACATTTACTACATGATCTACTTGTTGGAGGAACTGATACTAGGGATGTCAACGGGGCGGGGAATCTAGAAAATGGTATGAAACCTGAAGAAATTGACATGGAAGGTGCAATAGATGGACTTGCCTTGAAGAAATGTGAATCCTTGAGAGTTATTCCAACCAAAATAAGTAATTAA 915 0.377 MDNKPHIALAKLAKTYGPILSLKLGQVTTIVVSSADMAKEILQTHDSLLSDRTVPHALTAFNHDQFGVGFLPLSPLWREMRRVCKNQLFSNKSLDANQYLRRHKIDELINYVSQCSLKGEAIDIGSVAFKTSINLLSNTIFSIDFANISAGTNDNKENKDLVINMAKTVGVPNMSDFFPLLRLIDPQGIKKTYLFYIGKLFSVFDNIIDQRLKLRNADDFVTNNDMLDSLLSLLEENPKEMDKEKMEHLLHDLLVGGTDTRDVNGAGNLENGMKPEEIDMEGAIDGLALKKCESLRVIPTKISN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00180 304 Pfam Cytochrome P450 3 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00180 304 SUPERFAMILY Cytochrome P450 3 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00180 304 Gene3D Cytochrome P450 1 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00180 304 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 260 - -
Trre9g00180 304 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00180 304 PRINTS E-class P450 group I signature 13 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00180 Trre-Chr9 1396170 1398721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00180 5 260 Cytochrome P450 AT2G45580 40.996 7.08e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00180 - - cave:132173603 275.018