Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00179 ATGGATAACAAACCACATAAATCCTTAGCCAAACTTGCCAAAATTTATGGTCCAATACTTAGTTTAAAGCTAGGCCAAGTAACAACCATAGTTATCTCTTCGGCCGATATGGCCAAAGAGATACTTCAAACTCATGATTCGTCACTTTCAGACCGATCTGTACCACATGCTTTAACTGCTTTCAACCACGACCAATTTGGTGTGGGATTCCTCCCTCTTTCGCCTATGTGGCGAGAGATGAGAAGGGTATGCAAAAATCAACTATTCTCTAACAAGAGTCTTGATGCAAATCAATATCTTAGGCGTAATAAGATAGATGAACTTGTTAATTATGTTTCTCAATATAGTCTAAAGGGTGAAGCAATAGACATTGGAAGTTTAGCTTTCAAGACTTCAATTAATTTGTTGTCAAATACTATTTTGTCCGTAGACTTTGCTACTATCTCTGCAGGTATTAATGACAATAAAGAAAACAAAGATTTGGTTATGAATATGGCGAAGACGGTAGGAGTGCCAAACATGTCTGATTTTTTCCCATTTTTGAGGTTGATTGATCCACAAGGCATAAAAAAGACCTATGTGTTTTATATTGAAAAGTTGTTCGGCGTTTTCAACAACATAATCGATCAAAGGTTGAAATTGCGAGAAGGGAACAATTTTGTCACCAACAACGACATGCTAGACTCCTTACTCGATCTTTTTGAAGAAAACAAAAAAGAGATGGACAGAGAAAAAATGGAACATTTACTACATGATCTAATTGTTGGAGGAACTGATACAACTACTTATACATTAGAATGGGCATTGACTGAACTACTTCGCAATCCAAATATAATGTCGAAGGCCAAAAAGGAACTTGAAGAAACCATTGGATTAGGAAACTCAATTGAGGAATCGGATGTTGCTAGACTCCCTTACTTACAAGCAATAATAAAAGAGACTTTACGTTTGCACCCAATAGCTCCACTTTTGCTCCCTCGAAAAGCAAAGAACGATGTAGAAGTCAATGGCTACATGATTCCAAAAGGTGCACAAATTTTCGTTAATGTGTGGGCTATTGGTAGAGACCAAAACGCATGGGAAAATCCAAATTTATTTTCACCAGAGAGATATTTGGGAACAAAGCTTGATATCAAGGGTCAAAACTTTCAGCTCACGCCGTTTGGCAGTGGAAGACGAATATGTCCCGGTTTGCCGTTGGCTATGAGGATGTTGCACATGATGTTGGGATCACTACTAATTTCTTTTGATTGGAAGCTAGAAAATGACATGAAACCTGAAGAAATTGACATGGAGGATGCAATAGAAGGACTTGCCTTGAGAAAATGTGAATCCTTGAGAGCTATTCCAACCAAAATAATTAAGTAA 1368 0.375 MDNKPHKSLAKLAKIYGPILSLKLGQVTTIVISSADMAKEILQTHDSSLSDRSVPHALTAFNHDQFGVGFLPLSPMWREMRRVCKNQLFSNKSLDANQYLRRNKIDELVNYVSQYSLKGEAIDIGSLAFKTSINLLSNTILSVDFATISAGINDNKENKDLVMNMAKTVGVPNMSDFFPFLRLIDPQGIKKTYVFYIEKLFGVFNNIIDQRLKLREGNNFVTNNDMLDSLLDLFEENKKEMDREKMEHLLHDLIVGGTDTTTYTLEWALTELLRNPNIMSKAKKELEETIGLGNSIEESDVARLPYLQAIIKETLRLHPIAPLLLPRKAKNDVEVNGYMIPKGAQIFVNVWAIGRDQNAWENPNLFSPERYLGTKLDIKGQNFQLTPFGSGRRICPGLPLAMRMLHMMLGSLLISFDWKLENDMKPEEIDMEDAIEGLALRKCESLRAIPTKIIK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00179 455 Gene3D Cytochrome P450 1 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 Pfam Cytochrome P450 3 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 CDD CYP76-like 13 450 - -
Trre9g00179 455 PRINTS E-class P450 group I signature 13 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 37 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 452 - -
Trre9g00179 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Trre9g00179 455 SUPERFAMILY Cytochrome P450 3 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00179 455 Coils Coil 224 247 - -
Trre9g00179 455 FunFam Cytochrome P450 76C4 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00179 Trre-Chr9 1389567 1391019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00179 5 452 Cytochrome P450 AT2G45570 47.903 1.41e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00179 - - gmx:100792017 545.043