Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00176 ATGGTAAACCCGAAAGGGTCTAGTCAATCAAAGATATGTTACAGGCCAATACGACCTTCTGATTTTGACGTTTTAGAGCGTATTCATGGAAGATTATTTCCTATCAGGTATGAATCTACTTTTTTCCAAGATGTGGTAAATGGACGTGATATTGTGTCGTGGGGAGCAGTTGATCTTAGTCGACCTAATGGCCAAAGTGACGAACTAATTGGATTTGTAACAGCGCGGATTGTTCTTGCAAAAGAAAGTGAGATAGTGGATTTGCTTGGATATGACTCGGCCAAATCTGATCAGACTTTAGTGTACGTTCTAACACTGGGAGTAGTGGAAGCATATAGGAGCCTCGGAATAGCTTCTTCTCTGATACGGGAGGTCATAAAATATGCTTCAAGTATTTCAACATGCAGAGCAGTTTACTTGCATGTAATTTCTTTCAATATCTCGGCAATCAATTTATACAAGAAAATGTCTTTCAAGTGTGTTAGAAGACTGCAGGGATTTTATTTTATCAATGGCCAACATTATGATTCATTTTTATTCGTTCACTACGTAAATGGGGGACGGTCTCCTTGCTCACCATTAGAGCTTTTGTCTGCAATTGTAAGCTTTATGAAGAGTGGCTTTAAGGCTGTGGCCGCAAAGCTGTGCAAGAACGAAGTAAGGAAGATCTCAAGGTGGGAAAAATGTAAAGAAAATCATTCTCTTGTCTCACTCTCAACAATACCCAACAAAAGAAACCTGGCGGTCGAGTGTAATGGTAGCGAGTTTGTGTAA 774 0.3979 MVNPKGSSQSKICYRPIRPSDFDVLERIHGRLFPIRYESTFFQDVVNGRDIVSWGAVDLSRPNGQSDELIGFVTARIVLAKESEIVDLLGYDSAKSDQTLVYVLTLGVVEAYRSLGIASSLIREVIKYASSISTCRAVYLHVISFNISAINLYKKMSFKCVRRLQGFYFINGQHYDSFLFVHYVNGGRSPCSPLELLSAIVSFMKSGFKAVAAKLCKNEVRKISRWEKCKENHSLVSLSTIPNKRNLAVECNGSEFV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00176 257 CDD NAT_SF 77 141 - -
Trre9g00176 257 FunFam Histone acetyltransferase MCC1 isoform A 6 187 - -
Trre9g00176 257 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016747
Trre9g00176 257 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 181 IPR016181 -
Trre9g00176 257 Pfam Acetyltransferase (GNAT) family 66 158 IPR000182 GO:0016747
Trre9g00176 257 Gene3D - 4 187 - -
Trre9g00176 257 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 4 239 IPR045141 GO:0004596
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00176 Trre-Chr9 1366111 1368964 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre9g00176 Acetyltransf_1 1.5e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00176 K22767 - gmx:100812509 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00176 9 1366111 1368964 Trre9g00176 9 1366111 1368964 ECH