Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00162 ATGGTGAATGGAGGAGGTGCAGTTGGGGTGAGAAATCTGAATGAAGAAGAAATTAAGTGGCCACCATGGTTGCAACCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAATAAAAGTGAATGCAATATGTATTGTTTGGATTGTATGAATGGAGCTCTTTGCTCTGCATGTCTGGCTTCTCATAAAGGACATAATGCTATTCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAATTTTTGGACATAACAGAAGTTCAAACATACGTTATAAACAGTGCAAAGATTGTTTTCTTAAATGAAAGACCTCAACCTAGGCCTGGCAAAGGAGTCACCAATACTTGCCATGTATGTGAACGAAGCCTTCCTGATTCCTTCTCCTACTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATTCCAGAAGAAGAAAAAGTTAAGTGAGAGAGATGCATCAGATGGTGAAGAATCATATAGTAATGGAAGTGGCAGAAACATAAACAAAATCCAAAGCTTCACACCATCAACACCGCCACCTTACAGAATAGCTAAGAGGAGGAAGGGAGTTCCACATAGAGCTCCTATGGGAGGAGACCTTATGATAGAATACTTATACTAA 660 0.397 MVNGGGAVGVRNLNEEEIKWPPWLQPLLQTSFFVQCKVHADSNKSECNMYCLDCMNGALCSACLASHKGHNAIQIRRSSYHDVIRVSEIQKFLDITEVQTYVINSAKIVFLNERPQPRPGKGVTNTCHVCERSLPDSFSYCSLGCKIVGTSKKFQKKKKLSERDASDGEESYSNGSGRNINKIQSFTPSTPPPYRIAKRRKGVPHRAPMGGDLMIEYLY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00162 219 MobiDBLite consensus disorder prediction 158 207 - -
Trre9g00162 219 MobiDBLite consensus disorder prediction 170 191 - -
Trre9g00162 219 Pfam PLATZ transcription factor 76 147 IPR006734 -
Trre9g00162 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00162 Trre-Chr9 1280213 1282636 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre9g00162 PLATZ 8.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00162 - - gmx:100792668 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02324 7 18841545 18843230 Trre9g00162 9 1280213 1282636 ECH
Trre9g00162 9 1280213 1282636 Trre9g00162 9 1280213 1282636 ECH