Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00157 ATGAGGCTTGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCACGGGGTCAAAGGCTGAAGAGTTTTCCGATGAAAACTGTCGCTCAGGGGAGGCTAATGGTCAGAATTCTATGAATGAGGGTAATGTACACTCTCTTAATAGCAGAGCTTGTGAAAACTTGCAGCATGTTGTCAGTGAAACAAGTAATATGCTCAGTGTTAATTCAAGTCATGATTCTCTATCTGAAAATGCTGAGAGTAAGCAGATCTTGTTGAATAAGACTCAGGATCCCAACCATTTAGAAGGTCATGATGACAACACATCCTGTATTAGTAGAGCATCTGATGCTAATTTAATGAATGACAGCCATCTAAGGATTGCAGACAGAATGAATATACTTCGAAATGGTAAATCTCTCTCTGATAATCAAAGCTCTATTGAGAATTGCAGTTCATCATTAACCAAAGAGAGTGCACCTGTTGTTATTTCTGGTGACAAATGTGTTGTCAATAAGGATAACCTTATTGAAGGCACTTCCAATGTTTCACTGAAACTATGTCCGAAGTCACAAGCAGATCCTGATAATGATGTATGTGATGCTAAAGTTGAAGACTGTAAATGTCCGGTCCATGATGGACATCATGAGAAAGCTGAAGAACTGGTTAAATCACCTGGCAAACAGGAATCTCAATCTGAAAATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTGAAAGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTTGTAGGTGCACTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAAAAACTCCCTGAAGGGGATTGGTTCTGTGAAGAATGCCAAGATGCAGTGGAAGCTGAAAACAAGAGGCTGGATGTTGAAGAAAAAAAAATCAGCAAAACTACTTCCACGTCACAAGTTTCTGGCAAAAGACTTCATGACAACATTGAAGTGGCTCCTCCAGCAGCAAAAAGGCAAGCTCTTGAATTAAGCAAAGGATCACCAAAGGTGTCAAGCCCCAGGAGATTGGTGCCACTATCACGAGAATCTTCATTTAAGAGCTCAGATAAATTAAAAGGGAAGTCTGGTCTTCAGATGCCTCCTCGTAACCACTCTGGTGGTGATGATGCACAGACTACTCGTTCTCCTTCCATTGGCCCCCGGGGTCAAATTTCAAAAAGTATGTTGTTGAAGTCTAATTCATCCAACAACTTAAGTTCCAAGCCGAGAGTCAAAACTGTCGATGAAGTTTTTCCACCAAGACCAAAAGGGGGCAATGAACAAACTTCTAAGAATATGGAGATACCTGGTCGGATGACAAGCAGATCGACATTATTCAAATCCTCTAGTTTGGGCCGATCAAGTGCAATTGAATCAAAAGTTAAAATGCTTTCACCTAAATCTGCAACTACTCAGGACTTGAAAGGGTCTCGACATTTCAAAGAATCAGGTGTTTTTGACCGAAAATATTTGTCTAGGAATGACCGGCCTGTGGCTAGTTCTGTTGTTTCCACACCTAAGGGTGATCAGAAGCTTACACCTCGGTCTGAAACCATTATTAAATCGTCATCTGTTAATAATCGAGAGGTGAAGGTTAACCACGATGGAAAATTAAGCGCGTCATCAAAATCAATGAACAATATAAGTCGTAAAAGTTTGGAGCCTCAAGAGAGAACATCAGCCAGTAATGATGAAGCTCTACAGGATGCGCTGCCTCGAACACGAGAGACAGGAAATCAGGGTGAGAAATCCAGAGAGAGTTTTAGTGATCGTGTAAGCCCAGCTGTTCCCACTGCATCAAAAAGTCCATTCTGTCAAAAATGTGAGGAATTTGGCCATTCTTTAGAATATTGCACAGCTGGTACTTTACCAGAATCTGGTGCTGAAATATCCGTCGCTGCCTCAAATATCTCAAAAGAGGAAACACATAAAGGCAATAGATTGAAAGCTGCAATCCAGGCTGCTTTACTTAAAAGGCCTGTAATTTACAGGAAGAAAGAAGTATCCAGTCAAACTGATGAAATTTCTACATCAGGCACAGAGTTGAATTGTGAAGTGACTGCACAAGACCCAGTCTTGGTTTCTAACACACATAAGAATAGTATTATTACTGAAGAAACTCATGAACAACAAAAAGTCCTCGAGAATTCTACATCTGCCAGTGATTTGAAGCAACTTAACTCTTCTTCAACTGGTCTTTGTTCCCAACAAGGAAAGTCGGATTTGGTCGGATTTAATGCTCAAAAACCTTCAGTGAGAGAATTGTCTACAAATGCTGTGGAAACAAGTGTTCTATCGAAGATGGTGGCCTTTCCTGAATTTGATTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCAGAATTATGTACTGGAGTTCAGGCACATTTATCCTCTTCTGCATCTCCTAAGGTACTTGAGGTAGTGACCAAGTTTAGTTCCGAAGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACTTGGCCATCGCAGTTTCATCATGGTGGTGCTAGAGTAGATAATATTGCTCTTTACTTCTTTGCCAGAGATCTTGAGAGCTATGAGAGACACTACAGGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAGTTTTTGATGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCGGAAAATTCACAGCGCTGGAATATGTTGCTTTTCTTATGGGGTGTATTTAGAGGGCAGAGGACCAATCATTCAGGTTCTGCAAAAAAGATATGTCCTCCAAGTTTGAATGCAATGCCAGTTGAGGTGAATTCTTCAACTGCTGTTGTGACTTTGTCTGAACATTGTTCGTCGAAGGGTATCGGTGAAAAATCAATTGATTCCGACAAAGCATGCAACCAATTATTTCAACAAACGAAATCCACTGATTCATCCCTGAAAGCTAGTGAGGGTGAACGGTGCAGAGAGACTAAACCTTCTGAAGAAATGGGAATAGGTGCAAGTTACAAGGCGGTGGAAGCAAATACTGGTTCTGCTATTTCCGACAAGCAAGAGAATACCCTCTGTTTGGAGATTCCTTCTGTTAGCAATCAAGAAAGAGATGCTGCCTACAAGGAGAGTATGAACTGTGATGAAGATCAGCAAAGGACTAAGAGGAAACAGAAAGAAGACCGTCAGTATATTGATTTGGAGAAAACTATTGACAATCACGAACCACATGCTGCAAGCTATATTGGTATGGATAAAACTTCAGAGAGAATGAAGATTGATCGAGATCAGCAAAGGCCTCAGAGGAAACAGAGAGATGGTAACTATATTGACTTGGAGGCAACTGTTGAAAATCAAGAACCAGATGCTGCAATCAATATAACTAAGGATAACATTCCAGAGAAAATGGAAGATGATGAAGATCGGCAACGACTTAAGAGGAAAGGCAAAGAAGATTATCACTATATTGACTTGGAGGCACCACTTCAGGAAGACCTGTCCACAGAAGGGGTCGAGAACCAGCTACCCAATGTATCAGTAGTTGGTTGTCAGAAAATTCCTTGGAATGAGTTAAATGGAAAATTAGAAGATGGAGAAAGTTCCAGAAAGAAGCTAAGGACAAGTTTTGGCGGGAATTATGGACATTGCAGTTCTGGGGGTAGAGACTCCTTTAATGACAGTTTGACATCTCTTGGAAATGAGCTTGGCTCTCATTCTTCAGTTGAGGACAAAGGATGTGAAGAAGCTTCCGATGAAAAAATCATCTGTGAGGACTTGGGGAAGATGGAAAGAACCTTCTTTCCCGTTGATTCTCGGAATATCAATGGTTCACAACTGGGGCTAAATGCCATGCCATTGAAAGGGATTCATGAGCGTGTAGATGTGATTCCAAATCTAAATCTTGCTTTAGGGGATGAAACAGAACTGCTGCCACCCCCTCCTCCTCCTCCTGCTGCTGCTCCTAAGGGTATTCTGCCTCCTTTCCTAGTTGGGGCAGTAGACAAGAAAGATAACCGTCCAGATAGTTTGGCAGATGGGCTAGAGGACGATGCTGCCGCTGCATCTCTTTCCCTTTCTCTATCATTTCCATCCTCAAGCAAGGAACACACACACGATTCTTCAACGACAGAGCTTTTGCCTGATGGGCACCGTGTGAATCCACCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4236 0.4183 MRLESGTCNVCSAPCSSCMHLNHALTGSKAEEFSDENCRSGEANGQNSMNEGNVHSLNSRACENLQHVVSETSNMLSVNSSHDSLSENAESKQILLNKTQDPNHLEGHDDNTSCISRASDANLMNDSHLRIADRMNILRNGKSLSDNQSSIENCSSSLTKESAPVVISGDKCVVNKDNLIEGTSNVSLKLCPKSQADPDNDVCDAKVEDCKCPVHDGHHEKAEELVKSPGKQESQSENESDESDVVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWFCEECQDAVEAENKRLDVEEKKISKTTSTSQVSGKRLHDNIEVAPPAAKRQALELSKGSPKVSSPRRLVPLSRESSFKSSDKLKGKSGLQMPPRNHSGGDDAQTTRSPSIGPRGQISKSMLLKSNSSNNLSSKPRVKTVDEVFPPRPKGGNEQTSKNMEIPGRMTSRSTLFKSSSLGRSSAIESKVKMLSPKSATTQDLKGSRHFKESGVFDRKYLSRNDRPVASSVVSTPKGDQKLTPRSETIIKSSSVNNREVKVNHDGKLSASSKSMNNISRKSLEPQERTSASNDEALQDALPRTRETGNQGEKSRESFSDRVSPAVPTASKSPFCQKCEEFGHSLEYCTAGTLPESGAEISVAASNISKEETHKGNRLKAAIQAALLKRPVIYRKKEVSSQTDEISTSGTELNCEVTAQDPVLVSNTHKNSIITEETHEQQKVLENSTSASDLKQLNSSSTGLCSQQGKSDLVGFNAQKPSVRELSTNAVETSVLSKMVAFPEFDYIWQGVFEVHRNGKPPELCTGVQAHLSSSASPKVLEVVTKFSSEVSLNEVSRLSTWPSQFHHGGARVDNIALYFFARDLESYERHYRGLLDHMIRNDLALKGVFDGVELLIFPSNQLPENSQRWNMLLFLWGVFRGQRTNHSGSAKKICPPSLNAMPVEVNSSTAVVTLSEHCSSKGIGEKSIDSDKACNQLFQQTKSTDSSLKASEGERCRETKPSEEMGIGASYKAVEANTGSAISDKQENTLCLEIPSVSNQERDAAYKESMNCDEDQQRTKRKQKEDRQYIDLEKTIDNHEPHAASYIGMDKTSERMKIDRDQQRPQRKQRDGNYIDLEATVENQEPDAAINITKDNIPEKMEDDEDRQRLKRKGKEDYHYIDLEAPLQEDLSTEGVENQLPNVSVVGCQKIPWNELNGKLEDGESSRKKLRTSFGGNYGHCSSGGRDSFNDSLTSLGNELGSHSSVEDKGCEEASDEKIICEDLGKMERTFFPVDSRNINGSQLGLNAMPLKGIHERVDVIPNLNLALGDETELLPPPPPPPAAAPKGILPPFLVGAVDKKDNRPDSLADGLEDDAAAASLSLSLSFPSSSKEHTHDSSTTELLPDGHRVNPPFLLFGRYTDK 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00157 1411 MobiDBLite consensus disorder prediction 1374 1411 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 221 244 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 315 334 - -
Trre9g00157 1411 SUPERFAMILY FYVE/PHD zinc finger 239 301 IPR011011 -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 555 593 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 1103 1122 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 390 428 - -
Trre9g00157 1411 Coils Coil 295 315 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 1050 1075 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 342 453 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 726 754 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 475 618 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 492 512 - -
Trre9g00157 1411 PANTHER - 250 977 - -
Trre9g00157 1411 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 326 IPR013083 -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 221 238 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 996 1010 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 515 545 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 991 1012 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 731 754 - -
Trre9g00157 1411 MobiDBLite consensus disorder prediction 1054 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00157 Trre-Chr9 1259935 1266756 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01137 7 7681763 7688104 Trre9g00157 9 1259935 1266756 ECH
Trre9g00157 9 1259935 1266756 Trre9g00157 9 1259935 1266756 ECH