Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00121 ATGGATTTTGAAGGTGAAGGTATTAGGACACCAAAGAGGGAAATGGAAGGTGAAGAAGGTGTGATGAGTTCAAAGATGAAGGGTGCTGGAAACCAAAGCAGCAAAGATATGATTTTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCTCAATTGGAAAAGCACTTAAGTAAGGTTTGGTCAAGAAGTGCCACCATCAATGAGTCCAAAAGGCCTAAAGAGGAGTGGGAGATTGATTTGGCCAAATTGGATTTAAGGTATATTGTTGCTCATGGTGCTTATGGTACTGTCTATAGAGGCACATATGATACCCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGTTGCCACTGCTGCGGAAACTGCTGCGTTACGTGCATCTTTTAAGCAGGAGGTTGCTGTCTGGCACAAACTCGACCATCCAAATGTCACCAGATTTGTTGGAGCTTCAATGGGAACTTCGAATCTTAAGATTCCTTCGAAAAACTCTTCAACCGATGATCAAGAAACACTTCCTTCTAGGGCATGTTGTGTTATTGTCGAGTTTCTTCCCGGTGGAACACTGAAACAATACTTAATCAGAAATAGGCGGAAGAAACTTGCTTATAAGGTTGTGGTTCAGCTTGCTTTGGACCTCGCCAGAGGTCTTAGCTATCTACATTCGAAGAAGATTGTGCACCGTGATGTTAAGACGGAGAATATGTTGCTAGATGGTAGCCGGAATCTAAAGATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTTTGAATCCAAGTGACATGACCGGTGAAACTGGAACCCTTGGATATATGGCTCCTGAGGTTTTGGATGGAAAACCTTACAACAGGACATGTGATGTCTATAGCTTTGGCATTTGCTTATGGGAAATTTATTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGACGTGTCTTCTGCTGTCGTCCGTCATAATTTACGCCCGGATATTCCAAGGTGTTGTCCGAGTGCATTGGCAAACATCATGAAGAAATGCTGGGATGCGAATCCAGGCAAACGTCCAGAAATGAGCGAGGTTGCAAGAATGCTAGAAGCACTGGATACAAGCAAAGGTGGTGGAATGATACCTGAAGATCAGAGTTCTGGTTGCTTTTGTTTTTCACCGGCTCGAGGTCCTTAA 1176 0.4354 MDFEGEGIRTPKREMEGEEGVMSSKMKGAGNQSSKDMIFRADKIDLKSLDAQLEKHLSKVWSRSATINESKRPKEEWEIDLAKLDLRYIVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGVATAAETAALRASFKQEVAVWHKLDHPNVTRFVGASMGTSNLKIPSKNSSTDDQETLPSRACCVIVEFLPGGTLKQYLIRNRRKKLAYKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDGSRNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRTCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRHNLRPDIPRCCPSALANIMKKCWDANPGKRPEMSEVARMLEALDTSKGGGMIPEDQSSGCFCFSPARGP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00121 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Trre9g00121 391 SMART serkin_6 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00121 391 PRINTS Tyrosine kinase catalytic domain signature 333 355 IPR001245 GO:0004672|GO:0006468
Trre9g00121 391 PRINTS Tyrosine kinase catalytic domain signature 223 241 IPR001245 GO:0004672|GO:0006468
Trre9g00121 391 PRINTS Tyrosine kinase catalytic domain signature 289 311 IPR001245 GO:0004672|GO:0006468
Trre9g00121 391 PRINTS Tyrosine kinase catalytic domain signature 185 198 IPR001245 GO:0004672|GO:0006468
Trre9g00121 391 ProSiteProfiles Protein kinase domain profile. 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00121 391 Pfam Protein tyrosine and serine/threonine kinase 89 362 IPR001245 GO:0004672|GO:0006468
Trre9g00121 391 FunFam Kinase suppressor of Ras 1 73 168 - -
Trre9g00121 391 MobiDBLite consensus disorder prediction 1 21 - -
Trre9g00121 391 CDD STKc_MAP3K-like 90 362 - -
Trre9g00121 391 FunFam Serine/threonine-protein kinase HT1 188 373 - -
Trre9g00121 391 Gene3D Phosphorylase Kinase; domain 1 73 166 - -
Trre9g00121 391 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 63 365 - -
Trre9g00121 391 MobiDBLite consensus disorder prediction 1 32 - -
Trre9g00121 391 SUPERFAMILY Protein kinase-like (PK-like) 59 362 IPR011009 -
Trre9g00121 391 Gene3D Transferase(Phosphotransferase) domain 1 190 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00121 Trre-Chr9 1079819 1082815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00121 30 391 MAP Kinase Kinase Kinase AT3G22750 81.215 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trre9g00121 PK_Tyr_Ser-Thr 2.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00121 - - gmx:100803917 690.649