Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00113 ATGGAGGAAACTGAAATTTCTTCCAAACCATGTGCTAAAGAAGCTAAAGAAGAGAGAATTGATTTAACCGAAATCACACTCCGAACCCTTCTTCTTTCTGACCTCGATGATCTCATGGTATGGACAACTGATGAAAAAGTGGCCAAGTTCTGCTCTTGGGAGCCTTACACAAGCAAAGACGACGGCGTCAAATTCATCGAAAATATACCAAACAAGTTTCTATGGTGCAAAGCAATATGCCTTAACGATCGTGCTATCGGCTGTGTTTCGCTGTTCTCGAGAGAACCTGATGATATATGCAGGAACAAATCTGCAGAACTTGGTTATGTTCTTGGTTCTAAATACTGGGGTAAAGGAATTGTGACATATGTTGTGAAACAAGTGGTTAAGGTTGCATTCAGTGAATTGACAAACTTAGAAAGGCTTGAAGCTTTTGTTGATGTTGAAAATGTTGGATCTCAAAGAGTGTTGGAGAAAGCTGGTTTCCAAAAAGAAGGAGTTCTTAGGAAGTATCTGTTCTTGAAAGGAAAAAGTAGAGATATGATCATTTCTAGTGTTATTTTTACTGATCTCAAATGA 579 0.3851 MEETEISSKPCAKEAKEERIDLTEITLRTLLLSDLDDLMVWTTDEKVAKFCSWEPYTSKDDGVKFIENIPNKFLWCKAICLNDRAIGCVSLFSREPDDICRNKSAELGYVLGSKYWGKGIVTYVVKQVVKVAFSELTNLERLEAFVDVENVGSQRVLEKAGFQKEGVLRKYLFLKGKSRDMIISSVIFTDLK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00113 192 Pfam Acetyltransferase (GNAT) domain 25 163 IPR000182 GO:0016747
Trre9g00113 192 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 190 - -
Trre9g00113 192 Gene3D - 11 188 - -
Trre9g00113 192 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 25 180 IPR000182 GO:0016747
Trre9g00113 192 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 25 186 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00113 Trre-Chr9 1027654 1028507 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre9g00113 Acetyltransf_3 1.5e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00113 - - cam:101514530 261.922