Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00112 ATGATGGAGGAAACATTTATTTCTTCAAAACCATGTACCAAAGAAGAGATCATTGATTTAACCAAAATCACACTCCGACCCTTTCATCTTTCAGACATCGACGATATCATGGTATGGTCAACCGATGAAAAAGTCGCCAAGTTCTGCTCTTGGGAGCCTTACACCAGCAAAGATGATGCAATCAACTTCATTGAAAGTATAGAAACCAAGTTTCTACGTTGCAAAGCAATATGCCACAACGATCGTGCTATTGGGTGTATGCTTTTGTTTGCAAGTTCACTTGATGATAAAAGCAGGAACAAATCTGCAGAACTTGGATATAATCTAGGTTCTAAATACTGGGGTAAAGGGATTGCAACATGTGCTGTGAAGCAAATTGTTAAGGATACATTCAGTGAAATGTCACACTTGGAAAGGCTTGAAGCTCTTGTTGATGTGGAAAATGTTGGATCTCAAAGAGTACTTGAGAAAGCTGGTTTCCAAAAGGAGGGAGTGGAGTTCTAA 504 0.3929 MMEETFISSKPCTKEEIIDLTKITLRPFHLSDIDDIMVWSTDEKVAKFCSWEPYTSKDDAINFIESIETKFLRCKAICHNDRAIGCMLLFASSLDDKSRNKSAELGYNLGSKYWGKGIATCAVKQIVKDTFSEMSHLERLEALVDVENVGSQRVLEKAGFQKEGVEF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00112 167 Gene3D - 16 167 - -
Trre9g00112 167 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 165 - -
Trre9g00112 167 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 167 IPR000182 GO:0016747
Trre9g00112 167 Pfam Acetyltransferase (GNAT) domain 23 161 IPR000182 GO:0016747
Trre9g00112 167 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 165 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00112 Trre-Chr9 1025430 1025933 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre9g00112 Acetyltransf_3 7e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00112 - - cam:101514530 243.432