Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00094 ATGCTTGAATTTAAGTCTATGGCATGTAAGACATTGAGAAATGAAATATGTGCAAGAATAATGCATGGTAGAAACATAGCTAAAGACATTGTAATTGATAGTAGTGATGGAAAAGAGAACAAGGTACATAAAAACAAAGACAAAAGAAGATACTCGCTTCTTCCACATTCTGCTGTTTGCTGCTTCTTCTGCATCACCCACCACTCACTCAGGATGGGAGAACCTGCATATACTGTGGCATCTGACAGTGAAACTACTGGGGAGGAAAAGACCTTACCTCTTCCTGAAATAGCAATTGGAATCGACATTGGCACCTCACAGTGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAAATCATTTGTCACTTTCAAAGATGAATCCCCCTCTGGTGGAGTTACCAGTCAACTCTCCCATGAGTATGAAATGCTGTTCGGAGATACAATTTTCAACATGAAACGTTTGATTGGAAGAGTTGATACTGACCCTGTAGTCCATGCAAGTAAAAATCTCCCATTTCTAGTGCAGACGTTGGACATTGGCGTTCGGCCCTTTATTGCTGCATTAGTGAACAATGTTTGGAGATCCACCACTCCAGAAGAAGTCCTTGCAATGTTTCTGGTGGAGTTAAGACTGATGACTGAATCTCATCTCAAACGACCGATAAGAAATGTAGTGCTTACTGTTCCAGTTTCCTTCAGTCGTTTTCAGCTGACTCGCCTTGAGCGTGCTTGTGCAATGGCTGGTCTTCATGTTCTCAGACTGATGCCTGAACCAACAGCAGTGGCATTGTTGTATGGACAGCAACAACAGAAAGCTTCTCAAGAAACTATGGGCAGTGGAAGTGAAAAAATTGCTCTCATTTTCAATATGGGGGCGGGTTATTGTGATGTTGCTGTGACTGCTACTGCTGGAGGAGTATCCCAGATAAAAGCATTGGCAGGAAGTACCGTTGGTGGAGAAGATTTGCTTCAGAATATGATGCGTCATCTCCTACCAGATTCTGAAAATATATTCAAGCGTCATGGGGTTGAAGAAATTAAATCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCCAACCAAGCAAGTGTTCAGGTCGATGTAGATTTAGGAGATGGTGTGAAGATATGCAAGGTTCTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTATTTGAAAAGTGTGAAAGCCTTATCATCCAGTGTTTACATGATGCAAAGGTAGATGTTGAGGACGTAAATGATGTGATAGTTGTTGGTGGATGTTCTTATATCCCAAGGGTGAAGAATCTTGTTACCAAAATATGCAAAGTACCAGAAGTTTATAAAGGTATAAATCCTTTGGAAGGTGCAGTTTGTGGTGCAGCGATGGAAGGAGCTGTTGCTTCCGGCATTATTGATCCCTTTGGAAATTTGGACTTGTTAACCATTCAAGCCACTCCTCTTGCCATTGGAATTCGAGCTGATGGAAACAAGTTTGTCCCTGTGATTCCGAGGAATACGACAATGCCGGCGCGTAAGGATCTACTTTTTACAACTATTCATGATAATCAAACAGAGGCATTGATACTTGTGTACGAAGGTGAGGGAAATAAGGCAGAAGAAAACCACCTGTTGGGATATTTCAAGATAATGGGAATACCTGCAGCACCCAAAGGAGTTCCTGAAATCAATGTGTGCATGGACATAGATGCTGCAAACGTGCTGAGAGTTTTAGCGGGTGTCGTGATGCCTGGATCTCGTACACCTGCAGTTCCTGTTATGGAAGTGCGAATGCCGATGGTTGATGATGGGCATGGTTGGTGTGCTGAGGCCCTAAATAGAACCTATGGTGCCACAATGGATTTGGTTACTCTCAAGAAAGCATGA 1926 0.4278 MLEFKSMACKTLRNEICARIMHGRNIAKDIVIDSSDGKENKVHKNKDKRRYSLLPHSAVCCFFCITHHSLRMGEPAYTVASDSETTGEEKTLPLPEIAIGIDIGTSQCSVAVWNGSQVELLKNKRNQKLMKSFVTFKDESPSGGVTSQLSHEYEMLFGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVLAMFLVELRLMTESHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASQETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTVGGEDLLQNMMRHLLPDSENIFKRHGVEEIKSMALLRVATQDAIHQLSNQASVQVDVDLGDGVKICKVLDRAEFEEVNKEVFEKCESLIIQCLHDAKVDVEDVNDVIVVGGCSYIPRVKNLVTKICKVPEVYKGINPLEGAVCGAAMEGAVASGIIDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGNKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRTPAVPVMEVRMPMVDDGHGWCAEALNRTYGATMDLVTLKKA 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00094 641 FunFam Heat shock 70 kDa protein 8 332 413 - -
Trre9g00094 641 FunFam Heat shock 70 kDa protein 8 487 602 - -
Trre9g00094 641 Gene3D - 283 461 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 237 257 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 464 484 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 432 448 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 573 589 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 492 511 - -
Trre9g00094 641 PRINTS 70kDa heat shock protein signature 97 110 - -
Trre9g00094 641 Gene3D Actin; Chain A, domain 4 332 413 - -
Trre9g00094 641 CDD HSP70_NBD 99 479 - -
Trre9g00094 641 Pfam Hsp70 protein 98 592 IPR013126 GO:0005524|GO:0140662
Trre9g00094 641 SUPERFAMILY Actin-like ATPase domain 295 480 IPR043129 -
Trre9g00094 641 Gene3D - 162 217 - -
Trre9g00094 641 FunFam Heat shock 70 kDa protein 8 162 217 - -
Trre9g00094 641 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 490 603 IPR029047 -
Trre9g00094 641 SUPERFAMILY Actin-like ATPase domain 97 281 IPR043129 -
Trre9g00094 641 PANTHER HEAT SHOCK PROTEIN 70KDA 98 592 IPR013126 GO:0005524|GO:0140662
Trre9g00094 641 Gene3D - 99 479 - -
Trre9g00094 641 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 494 599 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00094 Trre-Chr9 935824 939774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00094 98 592 Calmodulin-binding Proteins AT3G12580 37.822 6.55e-104 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00094 K09489 - gmx:100809773 979.163