Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre9g00081 | ATGCTGGCGAATCATATCCAAAACGGCATCGAATCGGCGAGGGTAGCTTGGTCACAGATTCCTAACTCCGATGAATCACAGTTCGTTGATGAAGACGGCGTTGGTCTTGTTAAGAAGAACGATGGAAGTGCTGTTGAGAGTCTTGACTATGAAGTCATAGAGAATTTTGCTTATCGAGAAGAACAGAAGCATAGAAGAAGGAAGATGTATGTAAGTTACTTGCTGGTGGTGAAATGGTTCTTTGCGTTGCTCATTGGCATTTGTACTGGACTTGCTGCTGTTTTCATCAATATTTCAGTTGAAAATTTTGCTGGCTGGAAGTACTCGATGACATTTAATATAATTCAGAAATCATATGTCGCTGGCTTTATTGTATATATCCTGATCAACTTGGTTTTAGTGTTTTCCTCTGTATATATCATCACACAATTTTCACCAGCAGCTGCCGGATCTGGTATTCCTGAAATCAAGGGTTACTTAAACGGAGTTGATACTCACGGCATCCTTCTTTTCAGAACTTTGATTGGAAAGGTATTTGGAAGCATTGGTTCAGTGGGGGGAGGCCTCGCTTTGGGTAAAGAAGGTCCTCTAGTCCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGATCCACTAAGTATCATCTAAATTCAAGGTGGTTTAATGTATTCAAAAGTGACCGGGATCGCCGTGATCTTGTAACTTGTGGGTGTGCAGCTGGAGTTGCTGCTGCATTTAGAGCTCCAGTTGGTGGCGTATTGTTTGCATTGGAAGAGGTTACATCTTGGTGGAGGAGTCAACTAATGTGGCGTGTCTTTTTCACTTCTGCTATTGTGGCTGTTGTGGTGCGAACTGCAATGGGGTGGTGTAAGAGTGGAAAATGTGGACATTTTGGATCCGGCGGATTCATAATATGGGATGTGTCAGATGGTCAAGAGGATTACTCGTTTGCAGAGTTGTTTCCAATGGCTATTATTGGGGTTATTGGAGGTCTACTGGGAGCTTTATTTAACCAGCTTACACTTTATATTACTACTTGGCGTCGAAATCATCTTCACAAGAAAGGGAACCGAGTCAAGATTATTGAAGCATGCCTTGTCTCCCTTCTAACATCAGTTATTTCATTTGGCTTGCCGCTTCTAAGAAAATGCAGTCCATGCCCTGAACCTGATCCTGCATCTGGTATTGAATGTCCACGACCTCCTGGAATGTATGGGAATTATGTTAATTTCTATTGTAGCAAAGACAACGAATACAATGACCTTGCTACTATTTTCTTCAATACACAGGATGATGCCATAAGGAACTTGTTCAGTGCAAAAACAATAAACGAGTACAGTTCCCAAAGTTTGTTAACCTTTTTGGTCATGTTTTATTCTTTAGCAGTTGTGACGTTTGGTACGGCCGTGCCTGCTGGTCAATTTGTTCCCGGTATTATGATAGGATCTACATATGGGCGTCTTGTTGGCATGTTTGTTGTAAAATATTACAGAAAACTCAACATTGAAGAGGGAACATATGCTTTGCTAGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTGTCTCTATGTGTCATTATGGTTGAAATCACAAATAACTTGAAACTTTTACCCCTTATTATGCTCGTTCTTCTTATATCAAAGGCTGTTGGTGATGCTTTTAATGATGGCATATATGAAGAGCAAGCTCGATTGAGAGGCATTCCATTACTTGAATCCAAGCCCAAATATGAGATGCGGAATATGATAGCAAAGGAGGCCTGTGGGAGTGGAAGGGTCACCTCTTTCCCTCGTGTTGTTAAGGTTTCAGATGTATTTTCCATTCTGCAGAGCAACACACACAACGGTTTTCCAGTGATTGAACACACAAGAAGTGGAGAACCGCTTGTTATTGGATTAGTGCTTCGGAGTCATTTATTGGTCATTCTGCAGTCTAAGGTTGATTTCCAGCATAGTCCTTTACCCTCTGATCCAAGAGGGGGGGGCAGGTCAATAAGGCATGATTCTGGTGAATTTGCAAAGCCTGTTTCTAGTAAAGGAATATGTCTTGACGATATACATCTAACATCAGAGGACTTGGAAATGTACATAGATCTTGCCCCATTTTTGAACCCCTCACCGTATATTGTACCGGAAGATATGTCTCTGACAAAGGTATACAATCTTTTCCGCCAACTTGGTTTGAGGCATTTATTTGTTGTTCCTCGTCCATCACGTGTTATTGGTTTAATAACCAGAAAAGATTTGTTAATTGAGGACGCGGAAAATGTGAATACATTAGAGCTCCGGGCAACTAGTGTAAGAACACAGCATCAGAATAAAAGATTGACTGCAAGGAATGCAGATGTGGAGCGCCCTTTGCTGAACGGACTTCTGGCTTAG | 2397 | 0.4172 | MLANHIQNGIESARVAWSQIPNSDESQFVDEDGVGLVKKNDGSAVESLDYEVIENFAYREEQKHRRRKMYVSYLLVVKWFFALLIGICTGLAAVFINISVENFAGWKYSMTFNIIQKSYVAGFIVYILINLVLVFSSVYIITQFSPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKVFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFNVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDVSDGQEDYSFAELFPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGNRVKIIEACLVSLLTSVISFGLPLLRKCSPCPEPDPASGIECPRPPGMYGNYVNFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYSLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNDGIYEEQARLRGIPLLESKPKYEMRNMIAKEACGSGRVTSFPRVVKVSDVFSILQSNTHNGFPVIEHTRSGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDPRGGGRSIRHDSGEFAKPVSSKGICLDDIHLTSEDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEDAENVNTLELRATSVRTQHQNKRLTARNADVERPLLNGLLA | 798 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre9g00081 | 798 | FunFam | Chloride channel ClC3 | 70 | 387 | - | - | |
| Trre9g00081 | 798 | Gene3D | - | 597 | 761 | IPR046342 | - | |
| Trre9g00081 | 798 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 35 | 761 | - | - | |
| Trre9g00081 | 798 | SUPERFAMILY | Clc chloride channel | 61 | 578 | IPR014743 | - | |
| Trre9g00081 | 798 | CDD | ClC_6_like | 46 | 576 | - | - | |
| Trre9g00081 | 798 | Gene3D | Clc chloride channel | 70 | 577 | - | - | |
| Trre9g00081 | 798 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 598 | 755 | - | - | |
| Trre9g00081 | 798 | FunFam | Chloride channel protein | 700 | 791 | - | - | |
| Trre9g00081 | 798 | PRINTS | Chloride channel signature | 146 | 163 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Trre9g00081 | 798 | PRINTS | Chloride channel signature | 177 | 196 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre9g00081 | K05016 | - | gmx:100811908 | 1446.8 |
Showing 1 to 1 of 1 entries