Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00064 ATGTCAAATGTATGGATATGTGAATTGTTATCATTAGTAACATTGTTGGTTTCATATAATGTCTTTGTGTGTGAATGTCAAGATCCCGGACCTCTGCCTAAAGAAGCTGAAAACTGCAATGGAGTTTTCATTTCTTATGATTTGCTCGATCGAAGAAAGGAATTCCCTCGCGTAAAGAATGTGACAGCACAATCTTGGGCCTTTAATGCAACTGCAAAAGTACTCAACACAGGAAAAGATGTTGTTAAATCATGGAAGTTGTTCATAGGATTTCAACATCATGAGATACTTGTCTCTGCTTCTGGTGGTATTCCATTTGAAACTGGTGACTTTCCAGCTTCTGTTGAAAATGGGACAACCTTAGTTGGAAGTTCTCTTCCTGATTTGGAAAGTTCCATTAACACAGCCAATGATTTGACCCAAATTCAAGCTTTGATTCAAATTGCTGGCACTCAATTTGGTGTTAGGCCACCTGGAATTCCCATGCCTAAAAACATCAAGTTGGTAAATGATGGATATAAGTGCCCCCAACCAAGTGTCAAGAAGAGTTCCATGTTTGCTTGTTGTAAAAGCGACCCAAAATACAAGCCAAAACTTTTGAAGACAAAATTCTTGGCACGTCAAAAAGGCGATATAACCATATCCTATGATATTCTTCAAGCATATGACAACAACTATCTTGTTGAAGTGACAATGGAGAATCATAACCCTTTAGGAAGGTTAGATCGTTGGAACTTAACATTTGAATGGACAAGAGGTGAATTCATATACTCAATGAAAGGAGCTTTCACACGTGAAATGGATTCCTCAAAATGCATCTATGGTGTTGCTGGACAATACTACAAAGATATGGATTTCAAAGTAACAAATTGTCAAAAGAATCCTATAATCAGTGATTTGCCTCCAGAAAAATATAATGATACTGATATTGGTAAAATACCATTTTGTTGTAGAAATGGTTCTCTTTATTCTATAATTATGGATCCATCACTATCTAAGTCTAAATTCCAAATGCAAGTTTTTAAATCTCCACCTGATTTGGATAAAAAATCTCTTTTCCCACCTGCAAGATGGAAAATTATGGGAGTTCTTAATGCAGATTATACTTGTGGACCACCTTTGAAAGTTGAACCTTCAACATTTCCAGAACCTAGAGGACTTGAAGCTACTGTTTTTGCTATTTCTACTTGGCAAATTGTATGCAATATGTCCAAACCAAAACAGAGGAAAACTAGATGTTGTGTTACTTTTTCTGCTTACTACAATGATTCTGTTGTTCCTTGTAACACATGTGCTTGTGGTTGTGATAACGACGACGATTATTATGACGGAAAGAAAAAACATCGGTGTGATCCGAACGCCAAGGCAATGCTACTTCCTTCGGAAGCTCTTCTTGTACCCTATGAGAATAGAACACTAAAAACAATTGCTTGGGCTAAGTTAAAGCATTCTCGTGTACCGAAAAGATTACCGTGTGGTGATAACTGTGGTGTTAGCATAAATTGGCACATAGTTTCAGATTACAAAGGTGGATGGAGTGCTAGAATTACTCTTTTCAATTGGAAATCTTTTCAATTTAAGGATTGGTTCACTGCCTTGCAATTCAAGAAAGGTGCTTCCCGTGGTTTTGAGAAAGTTTATTCTTTTAATGGTTCATTACTTTCAAAATTCAACAACACTATTTTTATGCAAGGAATGTTGGGAGGAACAAATTATTTGATAGCACAAGACAATGACACCAATCCAAAGATTCCTGGTAAACAACAATCTGTTATTTCTTTTACCAAAAAATTTACACCAAAGATGAAAATAGCAAAAGGAGATGGGTTTCCTTCAAAAGTAATTTTCAATGGAGAAGAGTGTTCCATTCCTACTCAATTTCCAATGCAAAGTGGAAACCAACATAATGTGTATTTAGTAAAACAGATCTTAGCCTTAGTTTTAGCTTTTACAATCAATCAAATATTAATGTATTAG 1977 0.3576 MSNVWICELLSLVTLLVSYNVFVCECQDPGPLPKEAENCNGVFISYDLLDRRKEFPRVKNVTAQSWAFNATAKVLNTGKDVVKSWKLFIGFQHHEILVSASGGIPFETGDFPASVENGTTLVGSSLPDLESSINTANDLTQIQALIQIAGTQFGVRPPGIPMPKNIKLVNDGYKCPQPSVKKSSMFACCKSDPKYKPKLLKTKFLARQKGDITISYDILQAYDNNYLVEVTMENHNPLGRLDRWNLTFEWTRGEFIYSMKGAFTREMDSSKCIYGVAGQYYKDMDFKVTNCQKNPIISDLPPEKYNDTDIGKIPFCCRNGSLYSIIMDPSLSKSKFQMQVFKSPPDLDKKSLFPPARWKIMGVLNADYTCGPPLKVEPSTFPEPRGLEATVFAISTWQIVCNMSKPKQRKTRCCVTFSAYYNDSVVPCNTCACGCDNDDDYYDGKKKHRCDPNAKAMLLPSEALLVPYENRTLKTIAWAKLKHSRVPKRLPCGDNCGVSINWHIVSDYKGGWSARITLFNWKSFQFKDWFTALQFKKGASRGFEKVYSFNGSLLSKFNNTIFMQGMLGGTNYLIAQDNDTNPKIPGKQQSVISFTKKFTPKMKIAKGDGFPSKVIFNGEECSIPTQFPMQSGNQHNVYLVKQILALVLAFTINQILMY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00064 658 Pfam COBRA-like protein 226 404 IPR006918 GO:0010215|GO:0016020
Trre9g00064 658 PANTHER COBRA-LIKE PROTEIN 7 6 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00064 Trre-Chr9 677184 679628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00064 33 652 COBRA Gene Family AT3G20580 56.051 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00064 - - gmx:100799716 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00064 9 677184 679628 Trre9g00064 9 677184 679628 ECH