Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g00058 | ATGTGCAGAGGTGACGTGTCACTCCCTCTCTGCCGACAGTGCGTTCTAAACGCAACACAGACACTCTTTTCAGAATGTTCCCTTTCTAAACAGGCAGTTATATGGTACGACGAGTGCACCGTACGCTACTCAAACCGTTCTTTTTTCTCCACCTTTGATACTAGACCTCGTGTTGGTCTACTCAACACAGCAAACATAACCAACCAAAAAAGCTTCATGCGTTTATTGTTTCAAACAATGAACAAAACTGCTGATGATGCTTCTAATCATCCTATTGGTTCTAAGAAATATGCAACAAATCAAGCTACTATATCTGGATTTCAGAATTTGTATTGTTTGGCTCAGTGTACCCCTGATTTGTCTCCTCAAGATTGTAGAAAGTGTCTTGGTAGTGTCATTGGGGATCTTCCTTGGTGTTGTATGGGAAAACAAGGTGGAAGGGTTTTATATCCTAGCTGTAATGTTAGATATGAATTGTACCCTTTTTTTCGCGTAGACAATGTTTCGTCTCCGTCTCCTTCATCGTCAATTCTTCCTCCTGCAACTACTAATTCAGCTGATTCCCGAGGAGGAAGCAGTGGGATATCAGGTGGGACAATTGTTGCAATTGTAGTTCCAATCATAGTTGTTGTGCTTCTGTTTATTGTGGCCATTTGTTTCTTGAGTAAAAGGGCAAGGAAGAAGCATGATTCTCTACAAGATGGAAACACTGCAAATGATATCACCAGTATGGAGTCCTTACAATTTGATTTCGGCACCATTGAAGCAGCCACCAACAAATTCTCTGCAGATAATAAGTTAGGTGAAGGTGGATTTGGTGAAGTTTTTAAGGGAACTCTTCCAAGTGGACAAGAAATAGCTGTCAAAAGACTCTCCAAAAGTTCTGGACAAGGTGGAGCAGAATTTAAGAATGAAGTTGTTGTAGTTGCCAAGCTTCAGCACAGAAATTTGGCTAGGCTTCTTGGATTTTGTTTGCAAGGAGAGGAAAAGATACTTGTTTATGAATATGTAGCCAACAAAAGTTTGGACTATACTCTATTTGATCCCGAAAAGCAAGGGAGACTAGATTGGGCAAGGCGGTACAGGATTATTGGAGGCATTGCTCGAGGCATGCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACACCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCGGATTTTGGCATGGCAAGAATAGTTGGAGTTGATCAAACTCAAGGAAACACTAGCAGAATTGTAGGAACTTACGGTTACATGGCTCCAGAGTATGCAATGCATGGAGAATTTTCAGTAAAGTCTGATGTATACAGTTTTGGAGTTCTCGTTATGGAGATTATAAGTGGCAAGAAAAATAGCTCTTTCTATGACACCGATGGTGCTGATGATCTAGTGAGCTATACATGGAAAGTTTGGATAGAAGGAGCACCATTAGAACTAGTGGACCCTATATTAAGAGAAAAAATTACTCCAAATGAAGTTATCAGAAGCATTCATATTGGTTTGCTTTGTGTTCAAGAAGATCCAAGTGACAGACCAACAATGGCATCAATAGTTCTTATGCTTGACAGTAACACAGTTACTCTTCCAACTCCGAAGCAGCCTGCATTTTTCATCAACAGTATTGCAACTGATCCAAACAGGCCAAAGGAGCTGCGATTTGATTCTTCTACAACAAAGTCAATAACAAGTTCTGTGAATGAGATGTCAATTAGTGAAATGGATCCGCGATAA | 1764 | 0.3997 | MCRGDVSLPLCRQCVLNATQTLFSECSLSKQAVIWYDECTVRYSNRSFFSTFDTRPRVGLLNTANITNQKSFMRLLFQTMNKTADDASNHPIGSKKYATNQATISGFQNLYCLAQCTPDLSPQDCRKCLGSVIGDLPWCCMGKQGGRVLYPSCNVRYELYPFFRVDNVSSPSPSSSILPPATTNSADSRGGSSGISGGTIVAIVVPIIVVVLLFIVAICFLSKRARKKHDSLQDGNTANDITSMESLQFDFGTIEAATNKFSADNKLGEGGFGEVFKGTLPSGQEIAVKRLSKSSGQGGAEFKNEVVVVAKLQHRNLARLLGFCLQGEEKILVYEYVANKSLDYTLFDPEKQGRLDWARRYRIIGGIARGMQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIVGVDQTQGNTSRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLVMEIISGKKNSSFYDTDGADDLVSYTWKVWIEGAPLELVDPILREKITPNEVIRSIHIGLLCVQEDPSDRPTMASIVLMLDSNTVTLPTPKQPAFFINSIATDPNRPKELRFDSSTTKSITSSVNEMSISEMDPR | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g00058 | 587 | ProSiteProfiles | Protein kinase domain profile. | 261 | 547 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g00058 | 587 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 382 | 394 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g00058 | 587 | Pfam | Protein tyrosine and serine/threonine kinase | 263 | 530 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g00058 | 587 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 222 | 336 | - | - | |
Trre9g00058 | 587 | Gene3D | Phosphorylase Kinase; domain 1 | 221 | 336 | - | - | |
Trre9g00058 | 587 | FunFam | cysteine-rich receptor-like protein kinase 10 | 337 | 539 | - | - | |
Trre9g00058 | 587 | MobiDBLite | consensus disorder prediction | 169 | 190 | - | - | |
Trre9g00058 | 587 | CDD | STKc_IRAK | 267 | 533 | - | - | |
Trre9g00058 | 587 | SUPERFAMILY | Protein kinase-like (PK-like) | 246 | 562 | IPR011009 | - | |
Trre9g00058 | 587 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 56 | 162 | - | - | |
Trre9g00058 | 587 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 10 | 587 | - | - | |
Trre9g00058 | 587 | Gene3D | - | 57 | 162 | IPR038408 | - | |
Trre9g00058 | 587 | Gene3D | - | 1 | 48 | IPR038408 | - | |
Trre9g00058 | 587 | ProSiteProfiles | Gnk2-homologous domain profile. | 1 | 48 | IPR002902 | - | |
Trre9g00058 | 587 | SMART | serkin_6 | 261 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g00058 | 587 | MobiDBLite | consensus disorder prediction | 559 | 587 | - | - | |
Trre9g00058 | 587 | MobiDBLite | consensus disorder prediction | 566 | 581 | - | - | |
Trre9g00058 | 587 | Pfam | Salt stress response/antifungal | 65 | 160 | IPR002902 | - | |
Trre9g00058 | 587 | Pfam | Salt stress response/antifungal | 1 | 45 | IPR002902 | - | |
Trre9g00058 | 587 | ProSitePatterns | Protein kinases ATP-binding region signature. | 267 | 289 | IPR017441 | GO:0005524 | |
Trre9g00058 | 587 | ProSiteProfiles | Gnk2-homologous domain profile. | 54 | 162 | IPR002902 | - | |
Trre9g00058 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 337 | 541 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g00058 | Trre-Chr9 | 634065 | 637400 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g00058 | 1 | 587 | Receptor kinase-like Gene Family | AT4G05200 | 56.303 | 0.0 | 647 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre9g00058 | PK_Tyr_Ser-Thr | 4.8e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g00058 | - | - | vun:114173511 | 907.516 |