Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00038 ATGCGCGGAAACGGCATCGAAGACCGATGGGGATCAACCGCCGTACCTGCTATTCGGAAGAAAGGAACAAGTGTTCGTCCATGGCTTGTCGTCGACGGCACCGGAGATGCACAGGTTGTTGAGGTCGGTAAACATGCCATCATGAGACGTACTGGTCTCCCCGCTCGTGATCTTCGAATCCTTGATCCTCTTCTCTCTTACCCTTCCACCGTTCTCGGTAGAGAAAGAGCTATTGTCATCAATTTGGAACACATCAAAGCTATCATCACCGCTAACGAAGTTCTTCTTCTCAATTCAAGAGACCCTTCCGTTACCCCTTTCGTTCAAGAACTCCAAGCTAGGATTCTCCGTCATCACGAAGCTACCACCAACATTCATCCCGATAATCAAGATGACTCTCACGGCGGCGGAGGAATTAAGATTCTTCCATTCGAATTCGTAGCGCTGGAGGCGTGTCTTGAAGCTGCTTGCAGCGTGTTAGAGAATGAAGCGAAGACGTTGGAGCAAGAGGCTCATCCTGCTCTTGATAAATTGACATCTAAAATCAGTACTCTTAATTTGGAACGTGTTCGTCAAATTAAGAGCCGATTGGTTGCGATAACAGGTCGTGTTCAAAAAGTGAGAGATGAATTGGAACATTTGCTTGATGATGATGAAGATATGGCTGAAATGTATCTCACTGAAAAGTTACTTCAACAGCAATTAGAACAAACTTCTTCTGAGGAAGATTCTGTTGTTGATGCTCGTGATGACATGGATATTCATGATAGAGCTGAAATATCATTGGAAGCAGGTGTAGGAGGAAGGGCAAGTTACAAGGAACAAGAAGAAGAAGAAGAAGAAGACGATGATAATCATAATCATAATCCGGGAGAACAAATGTTTGGTGCTGCAAATCTAAGGGAAAGCCGTGGAACACGTGCAAGCACTGTCTACAGTGCCGCCACCATCAAGCTTGATGTTGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTTCAGATTGATGGCACTCTCAACAAGCTCTCCACGCTGAGGGAGTATGTGGATGACACTGAGGATTACATCAACATAATGCTGGATGACAAACAGAACCATCTTCTCCAAATGGGAGTCATGTTGACCACAGCGACTCTGGTAGTGAGTGCATTTGTTGTTGTGGCTGGTGTGTTTGGCATGAATATTACTATTGAACTGTTTAATGATAACGTGCATGGGATGACGAACTTTCTCTGGACTGTTGGTGGAGGGACTGCCGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAAGGCTTGCTAGAATAA 1320 0.453 MRGNGIEDRWGSTAVPAIRKKGTSVRPWLVVDGTGDAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARILRHHEATTNIHPDNQDDSHGGGGIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLLQQQLEQTSSEEDSVVDARDDMDIHDRAEISLEAGVGGRASYKEQEEEEEEDDDNHNHNPGEQMFGAANLRESRGTRASTVYSAATIKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNITIELFNDNVHGMTNFLWTVGGGTAGTIFLYVVAIAWCKHKGLLE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00038 439 MobiDBLite consensus disorder prediction 265 294 - -
Trre9g00038 439 CDD Mrs2_Mfm1p-like 28 437 IPR039204 -
Trre9g00038 439 Gene3D Magnesium transport protein CorA, transmembrane region 102 367 - -
Trre9g00038 439 FunFam Magnesium transporter MRS2-1 16 99 - -
Trre9g00038 439 Coils Coil 150 170 - -
Trre9g00038 439 Gene3D - 15 99 - -
Trre9g00038 439 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 438 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00038 Trre-Chr9 464082 465891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00038 28 439 MRS2 Gene Family AT3G19640 64.732 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00038 - - cave:132177566 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00038 9 464082 465891 Trre9g00038 9 464082 465891 ECH