Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05950 ATGAAACATTGCCTCTATCGCTCTTCCTTTTCTTTTCTCACTTCTTTCAACCATAATTTATTAATATCTCTGCTCTCTCCTCCTGTTATTCTAATCAATACATATGGCTTCTTCTCCTCCTCCTCCCCTGCTGCTGCTCATCACTCTATGAATAATAAAAGATTATGGAAGCAAACAATTCTGCTGTCATTTCAAATTGTTGGAGTTGTTTATGGTCAAATTAGCACTGCTCCCTTATATGTGTTTAGTACAATGCGAGTGAAAGATCTTGAATCCGAGGAGGTTGTTTATGAACTCTTCTCCTTCATTTTTTGGACTCTCACAACTATTTCTTTGATCAAGTATGCCCTCATAGTCCTCAAAGCTGATGATAAAGGAGAGGGTGGTACTTTTGCTTTATACTCGCTGTTATGTAGAAATGCAAAAGTTGGGCTACTCCCTTGTGATAAAACCGCCAATGAGGTCATGCTTTTTGATGAGGAGGAAACAACAAATCCTTCTTCTAAGATCATCAATTCTGATTCCAAAGCACGAAGGGCCATTGAGAAACACAAGTCCGGCCATTATTTGATATTGTTCCTCGCCCTCTTTGGTTCATGTATGACAATTGGGGCTGCAGTCCTCACTCCAGCTCTCTCAGTATTATCAGCTTCATATGGTGTTCAACGATCCTTGTCGGAAATGGCAAGCCTATTTTCTTCGTCACGGCATACTCAGGATTCTGTGTCAAATGTTCTACAAAAATATGTACCCGTTCCCTCTGCGTGTGTTATATTGATTGGCCTTTTCGTACTACAGCCTTGCGGTACACATAAAATTGGGTTCATGTTTGCCCCAATTATTGCTGTTTGGCTTTTGTTTGTTGGTGTGGTGGGCGCGTATAATATATTCCACTGGGATGTTAAAATCATCTATAAAATATCCCCACAATACTTGTTCAAATTCATGAGGAATATTGATGCCGGCAGATGGAGGTTGTTGGGGAGCGCCATTTTATGTGCAGCAGGATCAGAGGCAATGTTTGCAGGCCAAGGCCATTTTTCTAAGAAATCAATCAAGATTACATTTATTTGCTTGATCTATCCGCTTCTTGTGATATGCTATGCGGGTCAGGCTGCATATATCTCTAAAAATTTGCACGCTCAAGATTTTAATCATCTTAGTCAATCTGTGCCAAGTCATTCCAAACATATATTCATAGTACTATCCCTACTTTCTTCGGCTGTCGGAAGCCAAGCAACTATAACAGCGAGCTTCTCCATCATTAACCGGTGTCTGGCACTAAATTGTTTTCCAAGAGTGAAAGTCATTCACACATCAAAAACGATACACGGCCAGGTTTACATCCCAGATGTCAACTGGTTATTGATGATTTTCAGTCTATCTATCACGATTGGTTTCAGAGACTTGGTGAAGATTGGCAACGCAACAAGTTTGGCTATAATATGTGGAATGCTGGTGACAACTAGTCTCATGTCACTAATCATTGCATTGTATTGGGAGAAGAATTTGATGATATCAGCATGCTTTCTGGTATGTTTCGGCCTTATTGAGGCTGCATATCTTTCAGCATGTATGCTGCAGTTTCACAAGGGAGCTTGGTATCTACTTGTCCTTTTGGTGGTGTCGATGACAGTCATGCTTTCATGGCATTATGGAACAGTGAAGAAGTATGAGTTTGATTTGCAAAACAAGGTGTCAACTGAATGGCTAATAGATGTTAGTCCAGGCCTTGGCATTTCAAGAGTAGCTGGAATTGGCTTCATTTACACTGACATAGTAACAGGAATCCCAGCTTTCTTTTCACATTTTATTACAAATCTTCCTGCATTTCATCAAGTGCTGATCATGGTGTCCTTCAAGTCTATGGCGGTGCCTCATGTTCCAGAGTGTGAAAGGTACCTGATAGGACGGATTGGGCCAAAAGATTATAAAATATATCGTTGCATTGTGAGATATGGATATTGCGATAATAATATCAGGGACACGGGTGATTTTGAGGAGAAAATCATTGGTGCTATAGGAGAATTCATTTCCATTGAACATTTGAGTGACATTGAATCAATGGTTTCGGCAGAAGAAAGAATGATGATAGTAGGAAAGTCATCATCATCATCAAGGCCAGATGGCAAGGCTTTAGTGCCTTTGATGAATGAAACATGTAACGAAGTGAGCATTATTAATGAAGCTCAGATTAGCCCGGCAGTAGTAATTGATGAAAGTGATCATAAGTTGTTAGCGAGTAGTAGCTCTTGCAACAAAAGAAAAAAAGTTAGGTTCATGTTGCCACCTGCTAGTAGTAGTCCTAAAATGGAAGAATCTGTGAGGAAAGAGCTGTTGGAACTAATTGATGCAAGGGAGAGTGGAAGTGCCTATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTATCTCAAGAGATTCTTAATAATGGTTTTTCGTTTCTTTGAAAAAAATGGCAGGGAACCTCCTGTTGCTCTCAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGTATGATGTGCACTATATAA 2541 0.401 MKHCLYRSSFSFLTSFNHNLLISLLSPPVILINTYGFFSSSSPAAAHHSMNNKRLWKQTILLSFQIVGVVYGQISTAPLYVFSTMRVKDLESEEVVYELFSFIFWTLTTISLIKYALIVLKADDKGEGGTFALYSLLCRNAKVGLLPCDKTANEVMLFDEEETTNPSSKIINSDSKARRAIEKHKSGHYLILFLALFGSCMTIGAAVLTPALSVLSASYGVQRSLSEMASLFSSSRHTQDSVSNVLQKYVPVPSACVILIGLFVLQPCGTHKIGFMFAPIIAVWLLFVGVVGAYNIFHWDVKIIYKISPQYLFKFMRNIDAGRWRLLGSAILCAAGSEAMFAGQGHFSKKSIKITFICLIYPLLVICYAGQAAYISKNLHAQDFNHLSQSVPSHSKHIFIVLSLLSSAVGSQATITASFSIINRCLALNCFPRVKVIHTSKTIHGQVYIPDVNWLLMIFSLSITIGFRDLVKIGNATSLAIICGMLVTTSLMSLIIALYWEKNLMISACFLVCFGLIEAAYLSACMLQFHKGAWYLLVLLVVSMTVMLSWHYGTVKKYEFDLQNKVSTEWLIDVSPGLGISRVAGIGFIYTDIVTGIPAFFSHFITNLPAFHQVLIMVSFKSMAVPHVPECERYLIGRIGPKDYKIYRCIVRYGYCDNNIRDTGDFEEKIIGAIGEFISIEHLSDIESMVSAEERMMIVGKSSSSSRPDGKALVPLMNETCNEVSIINEAQISPAVVIDESDHKLLASSSSCNKRKKVRFMLPPASSSPKMEESVRKELLELIDARESGSAYFLGQSHLVVRDGSNYLKRFLIMVFRFFEKNGREPPVALKIPHAALVEVGMMCTI 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05950 846 Pfam K+ potassium transporter 64 656 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre8g05950 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 51 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre8g05950 846 NCBIfam potassium uptake protein 62 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05950 Trre-Chr8 59756480 59760408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05950 52 846 Inorganic Solute Cotransporters AT1G70300 44.665 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05950 K03549 K12236 gmx:100801073 1214.91