Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05906 ATGAAGAACATTCTTAAGAAACTTCATATAATGTCTAATAATCAATCAGAAGATGCACAATCAGAAAGGAGCAATAAGTCAAATGATGGCTCATCTTCATCTCCTACAACCCGAAAGAAGCTTTCTAATTGGTTGCAATCGGTTTCTTCTAATAGGCAGACTCCTAGCAGTCCTCCATCACCAAACCTGGCAAGAGGAGAGCTATCTGATTCAGTGAGCTTTGGCGGCGGCGGTGGTGGTGGTTTGGATATGGTGGTCTGTGATTCGACGAAGCGTGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAGATTCAACTTGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAACAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTTGCATATCGATACTGGAATTACAATGCTCTTGGCTATGATGACAAGATCTCAGACGGTTTCTACGATCTGTACGGTGTCTTAACCAATTCAACCTCGACAAGAATGCCTTCTCTGGTAGATCTGCAAGGAACACCAACTGGAAATGATGTAAAATGGGAAGCAGTCTTGGTCAATAGGATTGCCGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCTTGGAGCTTGCAGTGAAGTCAAGAGAAGATTTTGAAATAGTTGTAGATAGAAATTTGGTCCACAAGCTTGCAATACTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGATCATTGACCATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTATTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCAGATGATGTGGCAATGAACTTTGTCAAGATTGATGAGGGAAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAACTGGATCACATATTGAATATGATGATTCTTCTTTTGTCGCAAGTCCTTCATCAAGAGACCTTGATTCATCTCACATTGCATCGTTCAGCACTGGGGTTGGAAGTTCATCCGAAGAAACTTCAGAGTTTGCAAATTTTGATAAAGGAAATAGATACAAACATTTTGCCTATGCGGAGAAGGAATCTGATGTAAGTAGCCCCCCCACTGGCAAGGAAGAATTAAAGAAACCATTAAACGAATTCAAAAATATCCCTAACGTAGAAAAGATCAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCATACACGCACGGAAGATCTCCATCTTGGACAGAAGGGATCAGTTCCCCGGCAGCACATCGAATGAAAGTCAAAGATGTTTCCCAGTATATGATTGATGCTGCCAAGGAAAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGTTAGGTTCCCAAAATGAGGCCAATTCTCCAACTGAAGAAAAAGATGAATATAAACTGGGAAGTGCGCAGAAGGAAGATACTGTTAGCGATAATCTAGGTCCTCGATTTTTGCCTCCGTTGCCTCCCCACCGAATTCATCCCAAAGCAAGTCCTAGCAATCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTGGGAGCTGGCTTTTCTCTTGATACAAGAGAACCTGCGGGACAGCACACACATTCCGAAGCAGAGGCAGCACAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGCGGCTGCGGCTGCTGTTGTTGCATCTTCAATGGTAGTTGCGGTTGCAAAGTCAAACACTGACTCGAATTTTGAGATTCCTGTAGCGGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACCGCTGCTGTCAATAAACAGTATGAGCAGGGGAATCGAAGTGACGGAGATACTGATGGCTCTGGTAATGAGCCAAAAGGTAGCGGTGATGGAAAGAATAATGCTTTAGGAGCAAACTCAGAAGGCGAGCGAAAATCTGATAGATCAGTAGGTAATGATAGCACAAAATCTGATTCTGCACTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGATGGGGGAGCGTATCGGACTTGGATCATACGGAGAAGTGTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTACTTCAAGATATCTCTGGGGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGGAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCACCAAATCTTTCAATCGTTACTGAATTTCTTCCTAGAGGGAGTCTGTATAGATTAATTCATCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATACTGCTCGAGGAATGAACTATTTGCACAACAGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAACCTTCTCGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTGTCTCGAATGAAGTACAGTACGTTCCTTTCTTCTAGATCAACTGCGGGAACAGCCGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTCAGCTACGGGGTCATATTGTGGGAGCTCTCTACTCTGCGGCAACCTTGGGGAGGAATGAATCCCATGCAAGTTGTTGGTGCTGTCGGTTTCCAGCATCGCCGTCTGGACATTCCAGATGATGTGGACCCTACCATTGCAAATATTATTAGACAATGCTGGCAGACAGATCCAAAGTTGAGGCCCACTTTTGCTGAAATTATGGCATTACTGAAGCCATTGCAGAAGCCAATTACTGGTTCTCAAGCGCAGAGAGCAAGTGCTCACAACACATCATCGCGAGTTGCTGAAAATCATGCAGAATAG 3066 0.44 MKNILKKLHIMSNNQSEDAQSERSNKSNDGSSSSPTTRKKLSNWLQSVSSNRQTPSSPPSPNLARGELSDSVSFGGGGGGGLDMVVCDSTKRDSGSSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTNSTSTRMPSLVDLQGTPTGNDVKWEAVLVNRIADSNLLKLEQKALELAVKSREDFEIVVDRNLVHKLAILVAEYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFVASPSSRDLDSSHIASFSTGVGSSSEETSEFANFDKGNRYKHFAYAEKESDVSSPPTGKEELKKPLNEFKNIPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGSQNEANSPTEEKDEYKLGSAQKEDTVSDNLGPRFLPPLPPHRIHPKASPSNQLEHSKPVEGLGAGFSLDTREPAGQHTHSEAEAAQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSNTDSNFEIPVAAAATATAAAVVATTAAVNKQYEQGNRSDGDTDGSGNEPKGSGDGKNNALGANSEGERKSDRSVGNDSTKSDSALDDVAEYDIPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITGSQAQRASAHNTSSRVAENHAE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05906 1021 MobiDBLite consensus disorder prediction 8 67 - -
Trre8g05906 1021 MobiDBLite consensus disorder prediction 449 468 - -
Trre8g05906 1021 PRINTS Tyrosine kinase catalytic domain signature 962 984 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 PRINTS Tyrosine kinase catalytic domain signature 899 909 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 PRINTS Tyrosine kinase catalytic domain signature 813 826 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 PRINTS Tyrosine kinase catalytic domain signature 852 870 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 PRINTS Tyrosine kinase catalytic domain signature 918 940 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 SUPERFAMILY Protein kinase-like (PK-like) 727 990 IPR011009 -
Trre8g05906 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Trre8g05906 1021 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 106 1002 - -
Trre8g05906 1021 Gene3D Transferase(Phosphotransferase) domain 1 818 1003 - -
Trre8g05906 1021 Pfam Protein tyrosine and serine/threonine kinase 739 990 IPR001245 GO:0004672|GO:0006468
Trre8g05906 1021 MobiDBLite consensus disorder prediction 999 1021 - -
Trre8g05906 1021 Gene3D Phosphorylase Kinase; domain 1 732 816 - -
Trre8g05906 1021 SMART serkin_6 739 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g05906 1021 MobiDBLite consensus disorder prediction 531 545 - -
Trre8g05906 1021 FunFam Serine/threonine-protein kinase isoform 1 730 817 - -
Trre8g05906 1021 ProSitePatterns Protein kinases ATP-binding region signature. 745 766 IPR017441 GO:0005524
Trre8g05906 1021 MobiDBLite consensus disorder prediction 524 606 - -
Trre8g05906 1021 FunFam Serine/threonine-protein kinase CTR1 818 1001 - -
Trre8g05906 1021 MobiDBLite consensus disorder prediction 450 468 - -
Trre8g05906 1021 MobiDBLite consensus disorder prediction 673 726 - -
Trre8g05906 1021 CDD STKc_MAP3K-like 745 991 - -
Trre8g05906 1021 MobiDBLite consensus disorder prediction 1 105 - -
Trre8g05906 1021 ProSiteProfiles Protein kinase domain profile. 739 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g05906 1021 Pfam Ethylene-responsive protein kinase Le-CTR1 145 348 - -
Trre8g05906 1021 MobiDBLite consensus disorder prediction 999 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05906 Trre-Chr8 59509813 59516420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05906 1 1005 MAP Kinase Kinase Kinase AT1G73660 62.196 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trre8g05906 PK_Tyr_Ser-Thr 1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05906 - - gmx:100778331 1578.15