Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05842 ATGGTTGGGAAGAATCATTCACCAAAGGAAAAGAATAGAGATTGGATTGGAGCACTTCTGAATAGTAGCTCAGGTTATTGTGATGATCATCGCGATCTTCGATCTAATGAGAAGAATACTTTCTGTGTAGATTGTGCAGTTAGATTGTGTAGGCACTGTAAGGATGATCATTCTAGTCATAGAAGGTTTCAGATATATAGATATTCATATCAGGATGTTTTTCGTCATTGCGACTTACAGAAGCATTTTGATTGCTCAAATATTCAGACTTATATATCCAATAATGAAAGGATTGTCCATCTAAAACCTCGGCCACCAATCTATAAATCTAAAGTTGGTGATCAATGCCCTGAATCTAAATCCAAAGAAAACAACTTATCAGCAAGATTTAAGTCGGGTGGTAGTACATGTGAGCAATGTGGAAAACACTTACAAGATGAGCGTAGTCGCTTCTGCTCCATTATATGCAAGATCTCAGTGCTTCCAAATCATCACTCACAAAAGAGTTCAGCTTATTCTTTCAACCAAAGTGGTAGATGCAACATCAGTCCAAAAACTGAGGCCATTGACTTTACTATGACTGATATCCTTAATTCGGAACCAGAGTCATCGATTTCTGAAGCTGAGCCATGTGGGCGGGTTGAAGTTCTGAATTTCAGAAAGCGTCCGAGAAAAACCGCTCCTCAGAGGCCTCTCTTTGTTTTCAGTTCTTAG 714 0.3894 MVGKNHSPKEKNRDWIGALLNSSSGYCDDHRDLRSNEKNTFCVDCAVRLCRHCKDDHSSHRRFQIYRYSYQDVFRHCDLQKHFDCSNIQTYISNNERIVHLKPRPPIYKSKVGDQCPESKSKENNLSARFKSGGSTCEQCGKHLQDERSRFCSIICKISVLPNHHSQKSSAYSFNQSGRCNISPKTEAIDFTMTDILNSEPESSISEAEPCGRVEVLNFRKRPRKTAPQRPLFVFSS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05842 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 174 - -
Trre8g05842 237 Pfam PLATZ transcription factor 67 158 IPR006734 -
Trre8g05842 237 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05842 Trre-Chr8 59122998 59124737 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre8g05842 PLATZ 5.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05842 - - gmx:100815813 334.339