Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05834 ATGGATGTTCTCAAAGATAGGTTCCTTATATCTATATCAGAAGGAAGAATTGTGATGAATGACCTAATACAGGAAATGGGGCATGAAATTGTTCGTCAACAATGTGTCAATGATCCTGGAAAACGTAGTCGACTATGGAAGCCTGAGGAAATTTATCATGTTTTGAAAAAGAACAAGGGGACGGATGCAATCCAGTTTAAACTTTATATGCCCCATAGCCATCTTGAACTACTTTGGCAGACAGATAAGGAATTACCAAATTTGAAAACACTTGATCTTCGTGGTTCTCTGAACCTGATTCAAATGCCAGATCTCGCTCAATGCCCAAATATTGAAGAAGTGATTCTTAGTCATTGCCCAAAGTTGGGTCAAGTTTATTCTTCTAGTTTCCTCTGCAAGCTCAAATGTTTATGGCTAAATGGTTGTGTTAGCCTTAGGAGTATACACATTCCTAGCAGTATTCTCCAGATAACTTCTGGATTAATAGTGCTCCATGGTTGTCACAATCTTGAGATGTTTTCAGTCAGTAATGCAAAAATGGGGGTTCACCTACAACAAAGTGGCAAGCGATCAAGGCCCTTTTCTTTGGAATGCGGCCTCGAAGGTACTTCTATTCGTACAAGACGAAGGAAATCAGTTACTTTTGACCCCCTGGATTATGCTGAGTTAACCAAAGAACCAAAGGATAATATACAATTACTAAACTTAACATTGTTGAGAGAAGGTTCGCCCACATTATTTCCAAGTCTAAATGAGCTTTGTTGGTTAGATCTCTCCAACTGTGAATCCCTCTCGAGCCTTCCAATATGCCTTTTTAAATTGAAATTTCTGAGAAGACTTTACCTCAGTTGTTGCTTGAATTTGGAAAAGTTTCCTGAAATCGAGGAGGCCATGGAAAGTTTAGTGGTGCTCATCTTAAACGAAACATCAATCAAGGAACTACCTTCATCCTTGAGCCATTTGGTCAACCTTGAAGAGCTGAGCTTGTACAATTGCCAGTTGCTTGAGACTATTCCATCTTCTATTGGAAGTCTAAGCAAACTCAACAAGTTAAACCTTACCTGTTGTGAATCACTTGAAACTTTTCCAAGCAGTATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGATCTTTCCAGAGATTTTGGAGCCTGCAGAAATTTTTGTTCACATTAACTTAACGCGAACAGCAATTAAGGAACTGCCTTCATCTTTGGAGAATTTGGTTGGGCTTCAAACCTTGTTGCTGAAGTTATGCACTGAGCTCGTGTCAATTCCAAACAGCATTGTTAATCTAAACCATCTATCTGAGCTTGATTGTTCTGGTTGTTGCAGTTTAGAAGACATCCCAAATAACATTGGTTGCCTATCATCCTTGAGGAAACTTTCACTTAAAGGAAGCAGTATTGTGAACCTTCCCGAGAGTATAGCTCATTTCTCAAGCTTGGAATTACTAGATTTAAGTGATTGCAAGAGGCTTGAATGTATCCCACAACTTCCACCATCTATGAACCAGTTGTTTGCTTATGATTGTCCGTCCGTCGGAAGAGTGATGCCAAATTCAAGATTAGAACTCCCGTCAAATTGCAAAGATGGTATATTTAAATTTCATTTAACCAATAGTACAGAACTGGATGAAAGAGCTCATAGTAATATTGCAGCCGAAGCATGGCTTAGGATCACTGAAGTTGCATACTGGGATGCGTTCTTCTGTTTTCCTGGAAGTGCAGTTCCTCGTTGGTTCCCTTATCGTTGTCAGGGATGTTCAGTGTCTGTGAACAGTGATTCTAAAAAGTGGCGCAGTGATAATAGCCTCGTTGGTTTCGCTTTGTGTGTCGCTTTGGGATGTGTGAATATGGATGATACAATATCAAGTTGCAGCTTTAGATACACATTAACATTCGAATATGATGGTTGCACACACACTCTTGACAACCATAACAATATAGAAAACAAATTCTATTGGAACGGTCCAAATATGTTACTCGTCCAAGATCACACATTCATATGGACACATCACTTGAACTTTGCAAGCATCGACAACATGCTCTTTGATGCTGACAACTTTACTATTGAGATCAGCAAGCATGATGATATCTCGTATACTAAATCAAGTGTCATGGTGAAAGAGTGTGGAATACGCCCTCTGTTTTCAACAAATAAAAGGGACGAGAACGTGGTTATAGTCTGA 2211 0.3921 MDVLKDRFLISISEGRIVMNDLIQEMGHEIVRQQCVNDPGKRSRLWKPEEIYHVLKKNKGTDAIQFKLYMPHSHLELLWQTDKELPNLKTLDLRGSLNLIQMPDLAQCPNIEEVILSHCPKLGQVYSSSFLCKLKCLWLNGCVSLRSIHIPSSILQITSGLIVLHGCHNLEMFSVSNAKMGVHLQQSGKRSRPFSLECGLEGTSIRTRRRKSVTFDPLDYAELTKEPKDNIQLLNLTLLREGSPTLFPSLNELCWLDLSNCESLSSLPICLFKLKFLRRLYLSCCLNLEKFPEIEEAMESLVVLILNETSIKELPSSLSHLVNLEELSLYNCQLLETIPSSIGSLSKLNKLNLTCCESLETFPSSIFKLKLTKLDLHGCSMLKIFPEILEPAEIFVHINLTRTAIKELPSSLENLVGLQTLLLKLCTELVSIPNSIVNLNHLSELDCSGCCSLEDIPNNIGCLSSLRKLSLKGSSIVNLPESIAHFSSLELLDLSDCKRLECIPQLPPSMNQLFAYDCPSVGRVMPNSRLELPSNCKDGIFKFHLTNSTELDERAHSNIAAEAWLRITEVAYWDAFFCFPGSAVPRWFPYRCQGCSVSVNSDSKKWRSDNSLVGFALCVALGCVNMDDTISSCSFRYTLTFEYDGCTHTLDNHNNIENKFYWNGPNMLLVQDHTFIWTHHLNFASIDNMLFDADNFTIEISKHDDISYTKSSVMVKECGIRPLFSTNKRDENVVIV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05834 736 Gene3D Ribonuclease Inhibitor 230 394 IPR032675 -
Trre8g05834 736 Gene3D Ribonuclease Inhibitor 66 192 IPR032675 -
Trre8g05834 736 Gene3D Ribonuclease Inhibitor 395 538 IPR032675 -
Trre8g05834 736 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 274 370 - -
Trre8g05834 736 SUPERFAMILY L domain-like 240 529 - -
Trre8g05834 736 Pfam C-JID domain 579 725 IPR045344 -
Trre8g05834 736 SUPERFAMILY L domain-like 67 178 - -
Trre8g05834 736 SMART LRR_typ_2 463 485 IPR003591 -
Trre8g05834 736 SMART LRR_typ_2 298 320 IPR003591 -
Trre8g05834 736 SMART LRR_typ_2 321 345 IPR003591 -
Trre8g05834 736 SMART LRR_typ_2 250 274 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05834 Trre-Chr8 59079877 59083313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05834 4 65 WRKY Transcription Factor Family AT4G12020 46.032 2.36e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05834 - - lja:Lj4g3v3113360.1 762.681