Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05831 ATGGACGAATGGAAAGCTGCTCTAACCCAAGTAGCTAGTCTCTCTGGTTGGGATTCACAAGTAACCAGACCAGAACATACACTCATTGAAGACATTGTGAAAGATGTTTTAAGAAAATTGAATTTGAATCATTCTTTCATAAGTAATGATCAAGGAATGATTGGAATTGACAAACATATTGAACAAATACAATCATTGTTGCACAACGACTCACAGGAAGTTCGAATTGTTGGAATTTGGGGTATGGGAGGAATAGGAAAAACAACAATTGCAAGAGCAATATATCACAAACTGGCAACTCAGTTCAGATCCAGCAGCATTATCCTAAATGTTCAACAAGAAATAAAGAGATGCGGACTACAACATATACGAAGCAAATATAGATCAGAGCTTCTAGGGGAAAACAACACATCCTCTAGATTTAGTTTTTCATATGAACGACCGATCAAATGGACAGAAGCTCTCCTTGTTCTTGATGATGTGAATAATTCGGATCAACTTAAAGATTTAATTGGAAGCCGTAGTAGCTTTGGGTATGGCAGTACTATCATTGTGACTTCTAGAGACATGCTGGTACTGAAGAATATTGATGCTGATGGAATATATGAAGTCAAGGAGATGGATTATTATGCCTCTCTGCGACTCTTCTGTTTAAATGCCTTTAAACAAAGCCATCCCATATCAGATTATGTGGGATTAACAGAGAAGATATTAAACTATGCCAAAGGTGTTCCATTAACTCTCAAAGTTTTGGGATCTTTGCTTTGCGGTAAAACAAAGAAAGCATGGGAAAGTCAGTTACAAAAGCTGGATAAGCTTCCCGAGAATGACATTTTCAAAGTGTTGAAATTAAGTTATAAAGGGCTTGACGAAGAACAGAAGGATATATTTCTCGACATAGCTTGTTTCTATAGAGGACATTTAGAAAATGTTGTAGCACAAACCCTGGATAGTTGTGGTTTCTCTGCTCACATTGGAATGGATATTCTCAAAGATAGATGCCTTATATCTATATCAGAAAGAAGAGTTGTGATGCACGATCTAATACAGGAAATGGGACATGAAATTGTTCGTCAAGAATGTGTCAATGATCCTGGAAAACGTAGTCGACTATGGAAGCCTGAGGAAATTTATCAAGTTTTCAACAAGAACAAGGGGACGGATGCAATCCAGTGTATATTCCTGGAAATGTGCATGATAGAAAAGGTTCAACTACATGCTGAAACTTTCAGAAAAATGGATAATCTTAGAATGATGGTGTTCTATAAGCCCCATGACTGTTCAAAAGGCTCAAATGTGACCCTTCCTGCATTTTTTAATTGTCTTCCAGATGATTTAAAATTTCTTCATTGGGATGACTTCCCTCTGAAATCTTTGCCACTAGACTTCTGTCCCAAAAATCTAGTTAAACTTTACATGCCCCATAGCCATCTTGAACAACTTTGGCAGACAGATAAGGAATTACCAAATTTGAAAACACTCGACCTTCGTTGTTCTCGGAACCTTATTCAAATACCAGATCTCGCTCACTGCCCAAATATTGAAGAAGTGATTCTTAGTCATTGCCCAAAGTTGGGTGAAGTCTATTCTTCTAGTTTCCTCTGCAAGCTCAAATGTTTATGGCTAAATGGTTGTGTTAGCCTTAGGAGGTTACACATTCCTAGCAGTATTCTCCAAAGACCTTCTGGATTAATAGTGCTCCATGGTTGTCACAATCTTGAGATGTTTTCAGCCAGTTTAGCAAAAAATGTTTTCAGAAACATTGTTCCTGTGGCAAAACACAGTGGCAAGCAATTCAAGTCCTTTTTTTGGAAATGCTCCCACGATGAAGAAGAAAAAAAAAAGAATTGCTACAACAGCGTAGTTACTTTTGACTCCCTGGATTATGCTGAGTTAAACAAAGAACCAAATGATAATATACAATTACTAAACTTAGCATTGTTGAGAGAAGGTTCGCCCACATTATTTCCAAGTCTAAATGATCTTTGTTGGTTAGATCTCTCCAACTGTGAATCCCTCTCGAGCCTTCCAATTGACCTTTTTAAGATGACATTTCTAAGAAGACTTTACCTCAGTCGTTGCTTTAATTTGGAGAAGTTCCCTGAAATCGAAGCGACTATGGAAAGTTTAGAGGTGCTCATGTTAAACGAAACAGCAATCAAGGAACTACCTTCATCCTTGCACCGTTTGGTCAACCTTGAAGAGTTGAGTTTGTACAATTGCCAGTTGCTTGAGACTATTCATTCTTCCATTGGAAGTCTAAGCAAACTCAACAAGTTAAACCTTACCTGTTGTGAATCACTTGAGACTTTTCCAAGTAGTATTTTCAAATTGAAGCTGAGAAAACTTGATTTGCATGGTTGCTTAATGCTGAAGACCTTTCCAGAGATCTTGGAACGTGCAGAAACCTTTGTTCATATAAACTTAACAAAAACAGCAATTAAGGAATTGCCTTCATCTTTGGAGTATTTGGTTGGGCTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGTATTGTTAATCTAAACTATCTATCTGAGCTTGACTGTTCTGGCTGTCACAGTTTAACAGAAATCCCAAATAACATTGGCAGCTTGTCATCATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAGCTCTTCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCGCCATCTCTAAACCAGTTATTGGCATATGATTGCCCGTCCATTGGAAGAATGATGCCAAATTCAAGGTTGGAACTCCCGTCAATTTCCAACAAGGATACCTTCAAATTTCATTTCACTAATAGTCAACAACTGGATGAAACTGCTTGCAGTAATATTGGGGCTGAAGCATGGCTAAGGATCACCGGAGATGCATATAGATCTGTGTTCTTATGTTTTACTTGGAGTTCAGTTCCACGTTGGTTCCCTTATCGTTGTACGGGACGTTTGGTAACCATGAAAAAAGATTCTCAAGATTGGCCTGCTAATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGATGTGTGGAAGATAGTCTTACATACAGATTAACATATGAGTCTGATGGTCGCACACACATTCTTCCTAACCATGACAAGATAAAAAACTATTATTATTGGAAGGGTCGAAGTAGGTTCGTTGTCCAAGATCACACATTCATATGGAAGTATCATTTGGACTTTGGAAGAATTGACAACAGCTTCTTTGATGCCCACAACTTCACTTTTGAGTTGAGAAAATCAAGGGTCGTGGTAAAAGAGTGTGGAATATGCCCTCTTTATACAAAAGAAAAGGATGATAATTGTGGTAATAGTTTGAGACTTTTAAATAATGACATTGAAGAACCAAGTGCCTTGGCTTGGGAGGAGGAGAAGAAGATGTAA 3456 0.3802 MDEWKAALTQVASLSGWDSQVTRPEHTLIEDIVKDVLRKLNLNHSFISNDQGMIGIDKHIEQIQSLLHNDSQEVRIVGIWGMGGIGKTTIARAIYHKLATQFRSSSIILNVQQEIKRCGLQHIRSKYRSELLGENNTSSRFSFSYERPIKWTEALLVLDDVNNSDQLKDLIGSRSSFGYGSTIIVTSRDMLVLKNIDADGIYEVKEMDYYASLRLFCLNAFKQSHPISDYVGLTEKILNYAKGVPLTLKVLGSLLCGKTKKAWESQLQKLDKLPENDIFKVLKLSYKGLDEEQKDIFLDIACFYRGHLENVVAQTLDSCGFSAHIGMDILKDRCLISISERRVVMHDLIQEMGHEIVRQECVNDPGKRSRLWKPEEIYQVFNKNKGTDAIQCIFLEMCMIEKVQLHAETFRKMDNLRMMVFYKPHDCSKGSNVTLPAFFNCLPDDLKFLHWDDFPLKSLPLDFCPKNLVKLYMPHSHLEQLWQTDKELPNLKTLDLRCSRNLIQIPDLAHCPNIEEVILSHCPKLGEVYSSSFLCKLKCLWLNGCVSLRRLHIPSSILQRPSGLIVLHGCHNLEMFSASLAKNVFRNIVPVAKHSGKQFKSFFWKCSHDEEEKKKNCYNSVVTFDSLDYAELNKEPNDNIQLLNLALLREGSPTLFPSLNDLCWLDLSNCESLSSLPIDLFKMTFLRRLYLSRCFNLEKFPEIEATMESLEVLMLNETAIKELPSSLHRLVNLEELSLYNCQLLETIHSSIGSLSKLNKLNLTCCESLETFPSSIFKLKLRKLDLHGCLMLKTFPEILERAETFVHINLTKTAIKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNYLSELDCSGCHSLTEIPNNIGSLSSLRELSLQESNIVSLPESIALLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPSIGRMMPNSRLELPSISNKDTFKFHFTNSQQLDETACSNIGAEAWLRITGDAYRSVFLCFTWSSVPRWFPYRCTGRLVTMKKDSQDWPANNRLVGFALSVVLGCVEDSLTYRLTYESDGRTHILPNHDKIKNYYYWKGRSRFVVQDHTFIWKYHLDFGRIDNSFFDAHNFTFELRKSRVVVKECGICPLYTKEKDDNCGNSLRLLNNDIEEPSALAWEEEKKM 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05831 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 300 IPR027417 -
Trre8g05831 1151 Gene3D Ribonuclease Inhibitor 619 779 IPR032675 -
Trre8g05831 1151 Pfam C-JID domain 990 1121 IPR045344 -
Trre8g05831 1151 PRINTS Disease resistance protein signature 148 162 - -
Trre8g05831 1151 PRINTS Disease resistance protein signature 76 91 - -
Trre8g05831 1151 PRINTS Disease resistance protein signature 486 502 - -
Trre8g05831 1151 PRINTS Disease resistance protein signature 241 255 - -
Trre8g05831 1151 SUPERFAMILY L domain-like 647 956 - -
Trre8g05831 1151 Gene3D - 39 200 IPR027417 -
Trre8g05831 1151 SMART LRR_typ_2 707 729 IPR003591 -
Trre8g05831 1151 SMART LRR_typ_2 895 922 IPR003591 -
Trre8g05831 1151 SMART LRR_typ_2 872 894 IPR003591 -
Trre8g05831 1151 SMART LRR_typ_2 659 683 IPR003591 -
Trre8g05831 1151 SMART LRR_typ_2 730 754 IPR003591 -
Trre8g05831 1151 Pfam NB-ARC domain 57 274 IPR002182 GO:0043531
Trre8g05831 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 677 IPR044974 GO:0006952
Trre8g05831 1151 Gene3D - 1 38 IPR035897 -
Trre8g05831 1151 Gene3D - 207 290 IPR042197 -
Trre8g05831 1151 SUPERFAMILY L domain-like 444 726 - -
Trre8g05831 1151 Pfam Leucine Rich Repeat 467 483 IPR011713 -
Trre8g05831 1151 SUPERFAMILY "Winged helix" DNA-binding domain 277 381 IPR036390 -
Trre8g05831 1151 Gene3D Ribonuclease Inhibitor 383 602 IPR032675 -
Trre8g05831 1151 Gene3D Ribonuclease Inhibitor 780 931 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05831 Trre-Chr8 59064395 59069430 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05831 753 913 WRKY Transcription Factor Family AT4G12020 31.902 4.60e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05831 - - ccaj:109803335 1199.5