Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05829 ATGGGACGGGAACTTGTTCGTCAAGAATGTGTCAATGATCTTGGAAGAAAATGCAGTCGGCTATGGAAGCATGAGGAAATTTATGAAGTTTTGACAGACAAGAAGGGGACGGATGCAATCCAATGTATATTCCTAGACATATGCAGGATAGAAAAGGTTCAACTACATGCTAAAACTTTCAAAAAGATGCATAACCTTAGAATGATGTTGTTCTATAAGTCTTATGGCTTTTCAAAAGACTCAAATGTGATCCTTTCTTCGTTACTTAATAGTCTTCCACATCATTTAAAATTTCTTCGTTGGGATGGCTTCCCTCAAGAATCTTTGCCATTAGGCTTTCGCCCCAAAAATCTTGTTAAACTGTATATGCCTCATAGCCGTCTTGAACAACTTTGGCTGGAAGATAAGGATTTACCAAATATGAAAACACTTGACCTTAGTGGTTCACAGAACCTGATTCAAATACCAGACCTTGCTCGATGCCCAAATATTGAAGAAGTAATTCTTAGTCATTGCAGAATGTTGGGTCAAGTTTACTCTTCTAGTTTCTTGTGCGAGCTCAAATGTTTATGGTTAAATGGTTGTATTAGCCTCAGGAGTTTACATATTCCTAGCAGTATTCTGCAGAGAACTTCTGGATTAATAGTGGTCTATGGTTGTAGCAGCCTTGAGATGTTTTCAGTTGGTAATGAAAAAATGAGGATTGTGTTGAGAGAAGGGTCACCTTCATTACTAAACTTAGAAGTGTTGAGAGAAGGGTCACCTTCATTACTTCCAAATCTTAACGAGCTTTGTTGGTTAGATCTCTCTTTTTGTGAATCCTTCTTGAGCCTACCAACTGAAATCTTCAAGTTAAAATTTCTAAAAAGACTTTACCTCCGTGGTTGCTATAATTTGGAGAAGTTCGGTGAGATTAACGAGACTATAGAAAGTTTATTGGTGCTCATCTTAGACCAAACAGCGATCAAGGAACTACCTTCATCCTTGCACCATTTGGTTGGACTTGAAGAGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCTTGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTTCCGAGCACCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAACTTTTGCTCACATTAACTTAACAAAAACAGCAGTTAAGGAACTGCCTTCATCCTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAACTTTCTATCTGAGCTTGATTGTTCTGGCTGTCGCAGTTTAACAGAAATCCCAAATAACATTGGTAGTTTGTCATTATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAACGCATCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCACCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGTCTGTTGGAAGAATGATGCCAAATTCAAGGTTGGAACTCCCATCAATTTCCAACAAGGATACCTTCGAATTTCATTTCACCAATAGTCAACAACTGGATGAAACTGCTCGCAGTAATATTGGGGCTGAAGCAAGGCTTAGGATCACCGAGAATGCATATAGGTCTGTGTTCTTTTGTTTTCCTGGGAGTACAGTTCCTCATTGGTTCCCTTGTCATTGTAAGGGACGTTTGGTAACCATGAAAAAAGATTCTTTAGATTGGCCAAGTGATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGACATATTGATATGGATGATGATATAATACCAATTCGCAGTAGCTTTAGATACAGATTAACATTTGAATCTGATGGCTGCACACACATTCTTCCTAATAATGACAAAATAAAATACTATTTCTATTTGAAGGGTCGAAGTAGGTCAGTTGTTCAAGACCACACATTCATATGGAAATATCACTTGGACTTGGCTAGCATTGATAACATGCTCTCTGATGCCCACAACTTCACTTTTGAGTTTAGCGAACACGACTATCTCATACTCAAAATCAAATGTCATGGTGAAAGAGTGTGGAATATGTCCTCTTTATACAAAAGAAAAGTATGA 2226 0.3845 MGRELVRQECVNDLGRKCSRLWKHEEIYEVLTDKKGTDAIQCIFLDICRIEKVQLHAKTFKKMHNLRMMLFYKSYGFSKDSNVILSSLLNSLPHHLKFLRWDGFPQESLPLGFRPKNLVKLYMPHSRLEQLWLEDKDLPNMKTLDLSGSQNLIQIPDLARCPNIEEVILSHCRMLGQVYSSSFLCELKCLWLNGCISLRSLHIPSSILQRTSGLIVVYGCSSLEMFSVGNEKMRIVLREGSPSLLNLEVLREGSPSLLPNLNELCWLDLSFCESFLSLPTEIFKLKFLKRLYLRGCYNLEKFGEINETIESLLVLILDQTAIKELPSSLHHLVGLEELSLRYCQKLEIIPSSIGSLGKLSKLDLTFCESLETFPSTIFKLKLTKLDLHGCSMLKTFPEILEPAETFAHINLTKTAVKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNFLSELDCSGCRSLTEIPNNIGSLSLLRELSLQESNIVSLPESITHLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPSVGRMMPNSRLELPSISNKDTFEFHFTNSQQLDETARSNIGAEARLRITENAYRSVFFCFPGSTVPHWFPCHCKGRLVTMKKDSLDWPSDNRLVGFALSVVLGHIDMDDDIIPIRSSFRYRLTFESDGCTHILPNNDKIKYYFYLKGRSRSVVQDHTFIWKYHLDLASIDNMLSDAHNFTFEFSEHDYLILKIKCHGERVWNMSSLYKRKV 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05829 741 Gene3D Ribonuclease Inhibitor 253 403 IPR032675 -
Trre8g05829 741 Gene3D Ribonuclease Inhibitor 404 524 IPR032675 -
Trre8g05829 741 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 382 535 - -
Trre8g05829 741 Pfam Leucine Rich Repeat 117 135 IPR011713 -
Trre8g05829 741 Gene3D Ribonuclease Inhibitor 23 252 IPR032675 -
Trre8g05829 741 SUPERFAMILY L domain-like 41 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05829 Trre-Chr8 59055557 59058197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05829 301 510 WRKY Transcription Factor Family AT4G12020 35.514 2.17e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05829 - - aip:107633930 809.675