Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05828 ATGTCAACACTAACTGAGAGGTGGATGAAGAAAGCAAAGAAACTGAAGTCAGGACTAAATGCGGCTGGACTCACTGGCTGGGACTCACGAGTAACGAGACCAGTACACAAACTTGTTGAAGACATTGAAATGGGACGGGAACTTGTTCGTCAAGAATGTGTCAATGATCTTGGAAGAAAATGCAGTCGGCTATGGAAGCATGAGGAAATTTATGAAGTTTTGACAGACAAGAAGGGGACGGATGCAATCCAATGTATATTCCTAGACATATGCAGGATAGAAAAGGTTCAACTACATGCTAAAACTTTCAAAAAGATGCATAACCTTAGAATGATGTTGTTCTATAAGTCTTATGGCTTTTCAAAAGACTCAAATGTGATCCTTTCTTCGTTACTTAATAGTCTTCCACATCATTTAAAATTTCTTCGTTGGGATGGCTTCCCTCAAGAATCTTTGCCATTAGGCTTTCGCCCCAAAAATCTTGTTAAACTGTATATGCCTCATAGCCGTCTTGAACAACTTTGGCTGGAAGATAAGGATTTACCAAATATGAAAACACTTGACCTTAGTGGTTCACAGAACCTGATTCAAATACCAGACCTTGCTCGATGCCCAAATATTGAAGAAGTAATTCTTAGTCATTGCAGAATGTTGGGTCAAGTTTACTCTTCTAGTTTCTTGTGCGAGCTCAAATGTTTATGGTTAAATGGTTGTATTAGCCTCAGGAGTTTACATATTCCTAGCAGTATTCTGCAGAGAACTTCTGGATTAATAGTGGTCTATGGTTGTAGCAGCCTTGAGATGTTTTCAGTTGATCTCTCTTTTTGTGAATCCTTCTTGAGCCTACCAACTGAAATCTTCAAGTTAAAATTTCTAAAAAGACTTTACCTCCGTGGTTGCTATAATTTGGAGAAGTTCGGTGAGATTAACGAGACTATAGAAAGTTTATTGGTGCTCATCTTAGACCAAACAGCGATCAAGGAACTACCTTCATCCTTGCACCATTTGGTTGGACTTGAAGAGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCTTGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTTCCGAGCACCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAACTTTTGCTCACATTAACTTAACAAAAACAGCAGTTAAGGAACTGCCTTCATCCTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAACTTTCTATCTGAGCTTGATTGTTCTGGCTGTCGCAGTTTAACAGAAATCCCAAATAACATTGGTAGTTTGTCATTATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAACGCATCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCACCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGTCTGTTGGAAGAATGATGCCAAATTCAAGGTTGGAACTCCCATCAATTTCCAACAAGGATACCTTCGAATTTCATTTCACCAATAGTCAACAACTGGATGAAACTGCTCGCAGTAATATTGGGGCTGAAGCAAGGCTTAGGATCACCGAGAATGCATATAGGTCTGTGTTCTTTTGTTTTCCTGGGAGTACAGTTCCTCATTGGTTCCCTTGTCATTGTAAGGGACGTTTGGTAACCATGAAAAAAGATTCTTTAGATTGGCCAAGTGATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGACATATTGATATGGATGATGATATAATACCAATTCGCAGTAGCTTTAGATACAGATTAACATTTGAATCTGATGGCTGCACACACATTCTTCCTAATAATGACAAAATAAAATACTATTTCTATTTGAAGGGTCGAAGTAGGTCAGTTGTTCAAGACCACACATTCATATGGAAATATCACTTGGACTTGGCTAGCATTGATAACATGCTCTCTGATGCCCACAACTTCACTTTTGAGTTTAGCGAACACGACTATCTCATACTCAAAATCAAATGTCATGGTGAAAGAGTGTGGAATATGTCCTCTTTATACAAAAGAAAAGTATGA 2238 0.3887 MSTLTERWMKKAKKLKSGLNAAGLTGWDSRVTRPVHKLVEDIEMGRELVRQECVNDLGRKCSRLWKHEEIYEVLTDKKGTDAIQCIFLDICRIEKVQLHAKTFKKMHNLRMMLFYKSYGFSKDSNVILSSLLNSLPHHLKFLRWDGFPQESLPLGFRPKNLVKLYMPHSRLEQLWLEDKDLPNMKTLDLSGSQNLIQIPDLARCPNIEEVILSHCRMLGQVYSSSFLCELKCLWLNGCISLRSLHIPSSILQRTSGLIVVYGCSSLEMFSVDLSFCESFLSLPTEIFKLKFLKRLYLRGCYNLEKFGEINETIESLLVLILDQTAIKELPSSLHHLVGLEELSLRYCQKLEIIPSSIGSLGKLSKLDLTFCESLETFPSTIFKLKLTKLDLHGCSMLKTFPEILEPAETFAHINLTKTAVKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNFLSELDCSGCRSLTEIPNNIGSLSLLRELSLQESNIVSLPESITHLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPSVGRMMPNSRLELPSISNKDTFEFHFTNSQQLDETARSNIGAEARLRITENAYRSVFFCFPGSTVPHWFPCHCKGRLVTMKKDSLDWPSDNRLVGFALSVVLGHIDMDDDIIPIRSSFRYRLTFESDGCTHILPNNDKIKYYFYLKGRSRSVVQDHTFIWKYHLDLASIDNMLSDAHNFTFEFSEHDYLILKIKCHGERVWNMSSLYKRKV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05828 745 Gene3D Ribonuclease Inhibitor 36 383 IPR032675 -
Trre8g05828 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 413 541 IPR044974 GO:0006952
Trre8g05828 745 Pfam Leucine Rich Repeat 160 178 IPR011713 -
Trre8g05828 745 SUPERFAMILY L domain-like 84 539 - -
Trre8g05828 745 Gene3D Ribonuclease Inhibitor 385 543 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05828 Trre-Chr8 59055557 59060391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05828 305 514 WRKY Transcription Factor Family AT4G12020 35.514 1.39e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05828 - - ccaj:109803335 721.079