Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05827 ATGTCAACACTAACTGAGAGGTGGATGAAGAAAGCAAAGAAACTGAAGTCAGGACTAAATGCGGCTGGACTCACTGGCTGGGACTCACGAGTAACGAGACCAGTACACAAACTTGTTGAAGACATTGAAATGGGACGGGAACTTGTTCGTCAAGAATGTGTCAATGATCTTGGAAGAAAATGCAGTCGGCTATGGAAGCATGAGGAAATTTATGAAGTTTTGACAGACAAGAAGGGGACGGATGCAATCCAATGTATATTCCTAGACATATGCAGGATAGAAAAGGTTCAACTACATGCTAAAACTTTCAAAAAGATGCATAACCTTAGAATGATGTTGTTCTATAAGTCTTATGGCTTTTCAAAAGACTCAAATGTGATCCTTTCTTCGTTACTTAATAGTCTTCCACATCATTTAAAATTTCTTCGTTGGGATGGCTTCCCTCAAGAATCTTTGCCATTAGGCTTTCGCCCCAAAAATCTTGTTAAACTGTATATGCCTCATAGCCGTCTTGAACAACTTTGGCTGGAAGATAAGAACCTGATTCAAATACCAGACCTTGCTCGATGCCCAAATATTGAAGAAGTAATTCTTAGTCATTGCAGAATGTTGGGTCAAGTTTACTCTTCTAGTTTCTTGTGCGAGCTCAAATGTTTATGGTTAAATGGTTGTATTAGCCTCAGGAGTTTACATATTCCTAGCAGTATTCTGCAGAGAACTTCTGGATTAATAGTGGTCTATGGTTGTAGCAGCCTTGAGATGTTTTCAGTTGATCTCTCTTTTTGTGAATCCTTCTTGAGCCTACCAACTGAAATCTTCAAGTTAAAATTTCTAAAAAGACTTTACCTCCGTGGTTGCTATAATTTGGAGAAGTTCGGTGAGATTAACGAGACTATAGAAAGTTTATTGGTGCTCATCTTAGACCAAACAGCGATCAAGGAACTACCTTCATCCTTGCACCATTTGGTTGGACTTGAAGAGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCTTGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTTCCGAGCACCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAACTTTTGCTCACATTAACTTAACAAAAACAGCAGTTAAGGAACTGCCTTCATCCTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAACTTTCTATCTGAGCTTGATTGTTCTGGCTGTCGCAGTTTAACAGAAATCCCAAATAACATTGGTAGTTTGTCATTATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAACGCATCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCACCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGTCTGTTGGAAGAATGATGCCAAATTCAAGGTTGGAACTCCCATCAATTTCCAACAAGGATACCTTCGAATTTCATTTCACCAATAGTCAACAACTGGATGAAACTGCTCGCAGTAATATTGGGGCTGAAGCAAGGCTTAGGATCACCGAGAATGCATATAGGTCTGTGTTCTTTTGTTTTCCTGGGAGTACAGTTCCTCATTGGTTCCCTTGTCATTGTAAGGGACGTTTGGTAACCATGAAAAAAGATTCTTTAGATTGGCCAAGTGATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGACATATTGATATGGATGATGATATAATACCAATTCGCAGTAGCTTTAGATACAGATTAACATTTGAATCTGATGGCTGCACACACATTCTTCCTAATAATGACAAAATAAAATACTATTTCTATTTGAAGGGTCGAAGTAGGTCAGTTGTTCAAGACCACACATTCATATGGAAATATCACTTGGACTTGGCTAGCATTGATAACATGCTCTCTGATGCCCACAACTTCACTTTTGAGTTTAGCGAACACGACTATCTCATACTCAAAATCAAATGTCATGGTGAAAGAGTGTGGAATATGTCCTCTTTATACAAAAGAAAAGTATGA 2196 0.3893 MSTLTERWMKKAKKLKSGLNAAGLTGWDSRVTRPVHKLVEDIEMGRELVRQECVNDLGRKCSRLWKHEEIYEVLTDKKGTDAIQCIFLDICRIEKVQLHAKTFKKMHNLRMMLFYKSYGFSKDSNVILSSLLNSLPHHLKFLRWDGFPQESLPLGFRPKNLVKLYMPHSRLEQLWLEDKNLIQIPDLARCPNIEEVILSHCRMLGQVYSSSFLCELKCLWLNGCISLRSLHIPSSILQRTSGLIVVYGCSSLEMFSVDLSFCESFLSLPTEIFKLKFLKRLYLRGCYNLEKFGEINETIESLLVLILDQTAIKELPSSLHHLVGLEELSLRYCQKLEIIPSSIGSLGKLSKLDLTFCESLETFPSTIFKLKLTKLDLHGCSMLKTFPEILEPAETFAHINLTKTAVKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNFLSELDCSGCRSLTEIPNNIGSLSLLRELSLQESNIVSLPESITHLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPSVGRMMPNSRLELPSISNKDTFEFHFTNSQQLDETARSNIGAEARLRITENAYRSVFFCFPGSTVPHWFPCHCKGRLVTMKKDSLDWPSDNRLVGFALSVVLGHIDMDDDIIPIRSSFRYRLTFESDGCTHILPNNDKIKYYFYLKGRSRSVVQDHTFIWKYHLDLASIDNMLSDAHNFTFEFSEHDYLILKIKCHGERVWNMSSLYKRKV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05827 731 PANTHER LEUCINE-RICH REPEAT-CONTAINING 360 517 - -
Trre8g05827 731 Pfam Leucine Rich Repeat 160 178 IPR011713 -
Trre8g05827 731 Gene3D Ribonuclease Inhibitor 372 525 IPR032675 -
Trre8g05827 731 SUPERFAMILY L domain-like 225 541 - -
Trre8g05827 731 Gene3D Ribonuclease Inhibitor 47 371 IPR032675 -
Trre8g05827 731 SUPERFAMILY RNI-like 84 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05827 Trre-Chr8 59055557 59060391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05827 291 500 WRKY Transcription Factor Family AT4G12020 35.514 1.28e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05827 - - ccaj:109803335 729.939