Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05826 ATGGATGTTCTCAAAGATAGGTGCCTTATTTCTATATCAGAAGGAAGAATTGTGATGCACGATCTAATACAAGAAATGGGACATGAAATTGTTCGTAAACAATGTGTCAATGATCCTGGAAAACGTAGTCGACTGTGGAAGCCTGAGGAAATTTATCAAGTTTTGAAAAAAAACAAGGGGACGGATGCAATCCAGTGTATATTCCTGAACATACGTAAAATAGAAAAGACAGATAAGGAATTACCAAATTTGAAAACACTTGACCTTCGTGGTTCTCAGAACCTTATTCAAATACCAGATCTTGCTCAATGCCCAAATATTGAAGAAGTGATTCTTAGTCATTGCCAAAAACTGGGTCATGTTTATTCTTCTAGTTTCCTCTGCAAGCTCAAATGTTTATGGTTAAATGGTTGTGTTAACCTTTGGAGTTTACACATTCCTAGCAATATTCTTCAGATAACTTCTGGATTAATAGTGCTCCATGGTTGTCACAATCTTGAGATGTTTTCAGTCAATCTCTCCAACTGTGAATCCCTCTCGAGCCTTCCAATTGACCTTTTTAAGATGACATTTCTAAGAAGACTTTACCTCAGTCGTTGCTTTAATTTAGAGAAGTTCCCTGAAATCGAAGCGACTATGGAAAGTTTAGAGGTGCTCATGTTAAACGAAACAGCAATCAAGGAACTACCTTCATCCTTGCACCGTTTGGTCAACCTTGAAGAGTTGAGTTTGTACAATTGCCAGTTGCTTGAGACTATTCCTTCTTCCATTGGAAGTCTAAGCAAACTCAACAAGTTAAACCTTACCTGTTGTGAATCACTTGAAACTTTTCCAAGTAGTATTTTCAAATTGAAGCTGAGAAAACTTGATTTGCATGGTTGTTCAATGCTAAAGACCTTTCCAGAGATCTTGGAACGTGCAGAAACCTTTGTTCATATAAACTTAACAAAAACAGCAATTAAGGAACTACCTTCATCTTTGGAGTATTTGGTTGGACTTCAAACATTGTGCCTGAAGTTATGCACTGAACTGGTGACACTTCCAAACAGCATTGTTAATCTAAACCATCTATCTGAGCTTGATTGTTCTGGATGTTGCAGTATTGTGAACCTTCCTGAGAGCATAGCTCACCTCTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAATGTATCCCACAACTTCCACCATCTATGAACTACTTGTTTGCTTATGATTGTCCGTCCGTTGGAAGAGTGATGCCAAATTCAAGGTTGGAACTCCCGTCAAATTCCAAAGAGGGTGTATTTGAATTTCATTTAACCAATAGTCAAGAACTGGATGGAAGTGCTCATAGTAATATTGCAGCCGAAGCATGGCTTAGGATCAGTGAAGTTGCATACAGGGATGTGTTCTTCTGTTTTCCTGGAAGTGCAGTTCCTCATTGGTTTCCTTATCGTTGTCAAGGATGTTCAGTGTCCGTGAACAATGATTCTAAAAAATGGCGCAGTGATGATAGCCTCATTGGTTTTGCTTTGTGTTTCACTTTGGGATATGAAGATACAATAACAAGTAGTTGTAGTGGCCTTAGATACACATTAACATTTGGATATGATGGTTGCACACACATTCATGATGCCGAATATACCCCAAACAAATACTATTGGAAGGGTGAATGTGGGCCAGCCGTCCAAGATCACACATTCATATGGAAATATCACTTGGATTTTGCAGGCAATGACAGTAGGCTCTTTGATGCCCACCCCATCACTTTTGAGATCAGCGAATATGATGATCTCTCATATTCTAAATCAAGTATCATGGTGAAAGAGTGTGGAATATGCCCTCTGTTTTCAACAAAAAAAAAGGACGAGAACGTGGTTATAGTCTGA 1881 0.3854 MDVLKDRCLISISEGRIVMHDLIQEMGHEIVRKQCVNDPGKRSRLWKPEEIYQVLKKNKGTDAIQCIFLNIRKIEKTDKELPNLKTLDLRGSQNLIQIPDLAQCPNIEEVILSHCQKLGHVYSSSFLCKLKCLWLNGCVNLWSLHIPSNILQITSGLIVLHGCHNLEMFSVNLSNCESLSSLPIDLFKMTFLRRLYLSRCFNLEKFPEIEATMESLEVLMLNETAIKELPSSLHRLVNLEELSLYNCQLLETIPSSIGSLSKLNKLNLTCCESLETFPSSIFKLKLRKLDLHGCSMLKTFPEILERAETFVHINLTKTAIKELPSSLEYLVGLQTLCLKLCTELVTLPNSIVNLNHLSELDCSGCCSIVNLPESIAHLSSLKSLDLSDCKRLECIPQLPPSMNYLFAYDCPSVGRVMPNSRLELPSNSKEGVFEFHLTNSQELDGSAHSNIAAEAWLRISEVAYRDVFFCFPGSAVPHWFPYRCQGCSVSVNNDSKKWRSDDSLIGFALCFTLGYEDTITSSCSGLRYTLTFGYDGCTHIHDAEYTPNKYYWKGECGPAVQDHTFIWKYHLDFAGNDSRLFDAHPITFEISEYDDLSYSKSSIMVKECGICPLFSTKKKDENVVIV 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05826 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 285 430 - -
Trre8g05826 626 Gene3D Ribonuclease Inhibitor 157 212 IPR032675 -
Trre8g05826 626 Gene3D Ribonuclease Inhibitor 213 429 IPR032675 -
Trre8g05826 626 Gene3D Ribonuclease Inhibitor 58 156 IPR032675 -
Trre8g05826 626 SUPERFAMILY "Winged helix" DNA-binding domain 2 56 IPR036390 -
Trre8g05826 626 SUPERFAMILY RNI-like 80 411 - -
Trre8g05826 626 Pfam C-JID domain 471 614 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05826 Trre-Chr8 59049150 59052062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05826 4 409 WRKY Transcription Factor Family AT4G12020 31.175 1.11e-30 127