Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05825 ATGGCTGGTGGCGATGAACACAGACTAAACCTTGAACCTGAGAAACAGAGCCTTCTCAATCGCCACACCGAAAAACACTTCACCGCCGGCGAAATCGTCCGTGACATTATCATCGGCGTTTCCGACGGACTCACCGTCCCGTTCGCCCTCGCCGCCGGTCTCTCCGGCGCCAATGCAACTTCTTCCATCGTCCTGACTGCCGGCATCGCAGAAGTCGCCGCCGGTGCAATATCGATGGGTTTAGGCGGTTATTTAGCAGCAAAAGGTGAAGCTGATCATTACAATAGAGAATTGAAAAGAGAACAAGAAGAAATCATCACAGTACCGGAGACTGAAGCGGCTGAGGTGGCGGAGATATTGGCGGAGTATGGAATAGAGGAGCATGAATATGGACCAGTGGTGAATGCTCTGAGAAAGAATCCACAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGTATAGTGCAATGACAATTGCCATTGCTTATGTATTGGGTGGAGTTGTTCCTCTCATTCCTTACATGTTCATTCCAAATGCAGCAGAGGCTGTTCTGTTTTCAGTAGTTGTTACATTGATTGCATTGCTTATATTTGGCTTTGTCAAGGGATGCTTCACCGGCAACAAACCTATCAGAAGTGCTTTGGAAACTGCTTTAATTGGCGCCATTGCCTCTGCGGCTGCTTATGGTTTGGCAAAGGCTTTCCATTCCTAG 747 0.4806 MAGGDEHRLNLEPEKQSLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKGEADHYNRELKREQEEIITVPETEAAEVAEILAEYGIEEHEYGPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALYSAMTIAIAYVLGGVVPLIPYMFIPNAAEAVLFSVVVTLIALLIFGFVKGCFTGNKPIRSALETALIGAIASAAAYGLAKAFHS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05825 248 Coils Coil 84 104 - -
Trre8g05825 248 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 246 IPR008217 GO:0005384|GO:0030026
Trre8g05825 248 Pfam VIT family 33 243 IPR008217 GO:0005384|GO:0030026
Trre8g05825 248 CDD CCC1 12 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05825 Trre-Chr8 59044351 59046813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05825 5 248 Nodulin-like Gene Family AT3G43660 25.610 1.99e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05825 K22736 - gmx:100793585 404.445