Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05784 ATGGTTGCTCTGTTTCTTTTCTTCTTAGTCACACTATTAACAACTTCAACCTCATCAATCTCAGACACGAATTCATTCATCTTCGGTGGTTGTTCTCGTCTCAAATACGCGCCGGGTTCCGCTTATGAAACCAGCGTTAACTCGGTCCTAACTTCGCTTGTTGACTCATCAGGCTTCACCACCTACAACAAATTCACCGGCACCGCCGCGTCGGAAACTGTGTACGGTCTTTTTCAGTGTCGTGGAGATTTAAACAATGATCAGTGTTCAAGCTGTGTGGCGCGTGCAGTGAGTCAATTAGGGACACTCTGTTTCGCTACTTACGGTGGGGCGTTACAGCTCGAAGGATGTTTCGTAAAATACGATAATGTTTCGTTTTTTGGGGTAGAGGATAAAACAGAAGTGATCAAGAAATGTGGACCGTCGATTGGGTTGACTTCTGATGCGTTTACTCGAAGGGATGGTGTGCTGGCTTATTTACAGTCGTCCGATGGGAGTAATAAAAATTTTATGACAAATTCGGTTGGGGATTTTCGGGGTGTGGCGCAGTGTACGGGGGATTTGAGTACAAGCAAGTGTCAGGATTGTATTTCGGAGGCAATCCAACGGTTGAAAAGTGAGTGTGGAGCTTCCACGTGGGGTGATATGTATTTGGGTAAGTGCTACGTGCGTTATTCGGAAGGTGGAGATCACTCGCGAGGTAGTAACGATGATGAGAATCACAATGATGATGAAATTGAGAAGACACTAGCCATACTAATTGGACTCATTGCTGGTGTTGCTCTAATCATAGTTTTCCTTTCCTTCTTGAATAAGGTCTGCGACAAGCAGAGAGGTGGTAAATAA 846 0.4492 MVALFLFFLVTLLTTSTSSISDTNSFIFGGCSRLKYAPGSAYETSVNSVLTSLVDSSGFTTYNKFTGTAASETVYGLFQCRGDLNNDQCSSCVARAVSQLGTLCFATYGGALQLEGCFVKYDNVSFFGVEDKTEVIKKCGPSIGLTSDAFTRRDGVLAYLQSSDGSNKNFMTNSVGDFRGVAQCTGDLSTSKCQDCISEAIQRLKSECGASTWGDMYLGKCYVRYSEGGDHSRGSNDDENHNDDEIEKTLAILIGLIAGVALIIVFLSFLNKVCDKQRGGK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05784 281 Pfam Salt stress response/antifungal 157 227 IPR002902 -
Trre8g05784 281 Pfam Salt stress response/antifungal 31 123 IPR002902 -
Trre8g05784 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 274 - -
Trre8g05784 281 Gene3D - 147 228 IPR038408 -
Trre8g05784 281 Gene3D - 22 126 IPR038408 -
Trre8g05784 281 ProSiteProfiles Gnk2-homologous domain profile. 131 230 IPR002902 -
Trre8g05784 281 FunFam cysteine-rich repeat secretory protein 3 23 126 - -
Trre8g05784 281 ProSiteProfiles Gnk2-homologous domain profile. 24 126 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05784 Trre-Chr8 58789356 58791893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05784 1 225 Pollen Coat Proteome AT4G20670 28.099 4.45e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05784 - - cam:101497633 441.81